TABLE 3.
Categories | Genes | |
Hub genes | FN1 (Fibronectin 1), IL6 (Interleukin 6), COL1A2 (Collagen Type I Alpha 2 Chain), COL4A1 (Collagen Type IV Alpha 1 Chain), COL4A2 (Collagen Type IV Alpha 2 Chain), SPARC (Secreted Protein Acidic And Cysteine Rich), MMP9 (Matrix Metallopeptidase 9) | |
Early genes | Upregulated and hypomethylated | NR1H4 (Nuclear Receptor Subfamily 1 Group H Member 4), ROCK2 (Rho Associated Coiled-Coil Containing Protein Kinase 2), HTATIP2 (HIV-1 Tat Interactive Protein 2), UHRF1 (Ubiquitin Like With PHD And Ring Finger Domains 1), NTM (Neurotrimin) |
Downregulated and hypermethylated | MAPT (Microtubule Associated Protein Tau), FAM69C (Family With Sequence Similarity 69 Member C), FHOD3 (Formin Homology 2 Domain Containing 3), IGSF21 (Immunoglobin Superfamily Member 21) |
Hub genes: potential candidate genes of DR which possess large number of interaction. Early genes: genes showing altered expression and methylation pattern during an early stage of DR.