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. 2020 Oct 25;11(11):1256. doi: 10.3390/genes11111256

Table 2.

The most densely interconnected regions of the protein-protein interactions (PPI) network are categorized by MCODE from our identified associated genes between Obesity, T1D, T2D, and MODY.

Cluster Score (Density * # Nodes) Nodes Edges Nodes IDs
1 33.61 83 1378 C3, TNC, APOA2, MTNR1A, MTNR1B, CXCL5, SERPINA1, AHSG, ALB, GAST, BMP4, SPP1, SST, APOA5, PYY, F5, FGF23, IGFBP3, PPY, CCK, TRH, CCKAR, GNRH1, GCG, GRP, OPRM1, HCRT, GPR39, GHSR, IGFBP7, DRD4, POMC, CX3CR1, ADRA2A, APOA1, TAC1, NTS, GAL, ADRA2B, TIMP1, HTR1A, CCR2, APOB, FGA, BDKRB2, GNAI1, KNG1, PNPLA2, APOE, APLNR, APLN, IGFBP1, CASR, AGTR1, CXCL8, EDN1, MLN, EDNRA, PROC, OXT, PCSK9, AGT, CNR1, DRD2, PIK3R1, PIK3CA, F2, CXCR4, SERPINC1, IGFBP5, CCL5, APP, HTR2A, CCR5, CSF1, CNR2, NPY, GCGR, CP, TF, IL6, CST3, ADORA1
2 16.788 34 277 GIP, PROS1, FGB, TGFB1, CLU, ADRB3, IGF1, MC4R, VWF, A2M, CALCA, PTH, IAPP, HGF, CGA, RAMP1, ADRB1, DRD1, F13A1, SERPINF2, SPARC, TSHR, GNAS, GLP1R, THBS1, GPBAR1, ADRB2, SERPINE1, ADM, CRH, MC3R, GHRH, IGF2, VEGFA
3 6.783 24 78 SH3GL2, INPPL1, TIMP2, CTSS, IL5, LTF, SHC1, PIK3C2A, IRS1, TFRC, MMP8, PTPN1, HP, B2M, LDLR, PRKCZ, MMP9, INS, WNT5A, FTH1, INSR, IGF1R, IGF2R, RPS27A

* Network computation based on node score cutoff and K-core; Cluster seeds are in bold.