Table 1.
General parameters of genome sequences analyzed in this study.
| Species_Strain | Genome Size [bp] | No. of Contigs a | No. of CDS (Prokka) | Hypothetical Proteins [%] | Coding Density | Max. Protein Length [aa] | Min. Protein Length [aa] | Signal Peptides | G+C [%] | rRNA Operons | tRNA | tmRNA | misc_RNA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cab_16DC122 | 1,131,589 | 1 | 992 | 44.15 | 0.89 | 3104 | 35 | 54 | 39.64 | 1 | 39 | 1 | 5 |
| Cab_C18-98 | 1,161,363 | 4 | 1017 | 44.14 | 0.89 | 1807 | 36 | 66 | 39.90 | 1 | 43 | 1 | 6 |
| Cab_S26-3 | 1,144,377 | 1 | 1002 | 43.51 | 0.90 | 1807 | 40 | 67 | 39.87 | 1 | 39 | 1 | 5 |
| Cav_10DC88 | 1,041,170 | 1 | 945 | 42.53 | 0.91 | 1780 | 32 | 43 | 36.92 | 1 | 39 | 1 | 6 |
| Cav_11DC096 | 1,040,930 | 1 | 902 | 41.35 | 0.90 | 1807 | 34 | 45 | 36.89 | 1 | 39 | 1 | 6 |
| Cav_12DC097 | 1,041,858 | 1 | 904 | 41.59 | 0.89 | 1807 | 34 | 45 | 36.89 | 1 | 39 | 1 | 6 |
| Cav_14DC103 | 1,042,060 | 1 | 907 | 41.45 | 0.89 | 1807 | 32 | 45 | 36.91 | 1 | 39 | 1 | 6 |
| Cca_GPIC | 1,173,390 | 1 | 989 | 42.87 | 0.91 | 3347 | 44 | 68 | 39.22 | 1 | 38 | 1 | 6 |
| Cfe_Fe-C56 | 1,166,239 | 1 | 981 | 41.99 | 0.91 | 3299 | 36 | 62 | 39.38 | 1 | 38 | 1 | 6 |
| Cga_08-1274-3 | 1,059,583 | 1 | 904 | 41.15 | 0.91 | 3121 | 35 | 43 | 37.94 | 1 | 39 | 1 | 7 |
| Cga_12-4358 | 1,058,551 | 1 | 905 | 41.21 | 0.90 | 3251 | 35 | 44 | 37.94 | 1 | 39 | 1 | 7 |
| Cga_13DC099 | 1,051,382 | 4 | 902 | 41.10 | 0.89 | 3257 | 46 | 38 | 37.83 | 1 | 39 | 1 | 7 |
| Cga_14DC100 | 1,051,382 | 3 | 902 | 41.35 | 0.89 | 3251 | 35 | 41 | 37.92 | 1 | 39 | 1 | 7 |
| Cga_14DC101 | 1,056,703 | 3 | 903 | 41.41 | 0.89 | 3251 | 35 | 40 | 37.92 | 1 | 39 | 1 | 7 |
| Cga_JX-1 | 1,059,522 | 1 | 918 | 41.17 | 0.91 | 2648 | 35 | 44 | 37.93 | 1 | 39 | 1 | 7 |
| Cib_10-1398-6 | 1,146,066 | 4 | 961 | 42.35 | 0.91 | 3126 | 31 | 60 | 38.32 | 1 | 38 | 1 | 5 |
| Cmu_Nigg | 1,072,950 | 1 | 887 | 39.12 | 0.90 | 3336 | 36 | 49 | 40.34 | 2 | 37 | 1 | 6 |
| Cpe_E58 | 1,106,197 | 1 | 938 | 40.19 | 0.93 | 3439 | 40 | 53 | 41.08 | 1 | 39 | 1 | 5 |
| Cpn_TW-183 | 1,225,935 | 1 | 1050 | 46.76 | 0.90 | 1827 | 32 | 60 | 40.58 | 1 | 38 | 1 | 5 |
| Cps_02DC15 | 1,172,182 | 1 | 991 | 42.78 | 0.91 | 3078 | 43 | 66 | 39.06 | 1 | 39 | 1 | 5 |
| Cps_08DC60 | 1,171,660 | 1 | 998 | 42.68 | 0.90 | 3255 | 43 | 67 | 39.05 | 1 | 39 | 1 | 5 |
| Cps_6BC | 1,172,032 | 1 | 984 | 42.78 | 0.91 | 3358 | 43 | 66 | 39.06 | 1 | 39 | 1 | 5 |
| Cps_CP3 | 1,168,150 | 1 | 1062 | 44.53 | 0.90 | 3131 | 35 | 60 | 39.06 | 1 | 39 | 1 | 5 |
| Cps_GR9 | 1,147,152 | 1 | 994 | 43.36 | 0.90 | 3104 | 39 | 60 | 39.08 | 1 | 39 | 1 | 5 |
| Cps_Mat116 | 1,163,362 | 1 | 1003 | 43.96 | 0.89 | 3165 | 35 | 57 | 39.06 | 1 | 39 | 0 | 5 |
| Cps_MN | 1,168,490 | 1 | 1001 | 43.05 | 0.90 | 3131 | 43 | 63 | 39.06 | 1 | 39 | 1 | 5 |
| Cps_NJ1 | 1,161,434 | 1 | 991 | 43.49 | 0.90 | 3253 | 43 | 60 | 38.96 | 1 | 39 | 1 | 5 |
| Cps_VS225 | 1,157,385 | 1 | 1054 | 44.11 | 0.90 | 2074 | 32 | 59 | 39.02 | 1 | 39 | 1 | 5 |
| Cps_WS-RT-E30 | 1,140,789 | 1 | 998 | 43.58 | 0.90 | 3104 | 39 | 59 | 39.03 | 1 | 39 | 1 | 5 |
| Csu_1-25a | 1,088,751 | 3 | 902 | 39.80 | 0.88 | 3363 | 31 | 47 | 42.07 | 2 | 37 | 1 | 6 |
| Ctr_434-Bu | 1,038,842 | 1 | 891 | 39.39 | 0.90 | 1787 | 43 | 55 | 41.33 | 2 | 37 | 1 | 6 |
| Ctr_A-HAR-13 | 1,044,459 | 1 | 903 | 39.86 | 0.90 | 1787 | 46 | 56 | 41.30 | 2 | 37 | 1 | 5 |
| Ctr_D-UW-3-CX | 1,042,519 | 1 | 892 | 39.68 | 0.90 | 1787 | 46 | 55 | 41.31 | 2 | 37 | 1 | 5 |
a Plasmids not included; Abbreviations: Cab Chlamydia (C.) abortus, Cav C. avium, Cca C. caviae, Cfe C. felis, Cga C. gallinacea, Cib (Cand.) C. ibidis, Cmu C. muridarum, Cpe C. pecorum, Cpn C. pneumoniae, Cps C. psittaci, Csu C. suis, Ctr C. trachomatis.