Table 5.
Characteristic genomic features of Chlamydia spp. with different host preference.
| Strain | PZ Size [nt] | ToxB [aa] | Trp Operon * | # Pmps | Inc Family Subtypes | SINC [aa] | HctA/HctB [aa] | Main Host |
|---|---|---|---|---|---|---|---|---|
| Cab_S26-3 | 11,776 | 18 | A, B, C, V, X, Y | 361 | 123/154 | ruminant | ||
| Cps_6BC | 29,145 | 3358 | 21 | A, B, C, V, X, Y | 502 | 116-123/197 | avian | |
| Cav_10DC88 | 5694 | 7 | A, B, C, V | 234 | -/86 ** | avian | ||
| Cga_08-1274-3 | 15,845 | 3121 | 10 | A, B, C, V | 237 | -/187 | avian | |
| Cib_10-1398-6 | 31,344 | 3126 | 22 | A, B, C, V | 242 | 118/199 | avian | |
| Cca_GPIC | 34,753 | 3347 | 7 | 18 | A, B, C, V | 238 | 125/152 | rodent |
| Cfe_Fe-C56 | 39,924 | 3299 | 6 | 20 | A, B, C, V | 240 | 126/168 | feline |
| Cpe_E58 | 42,163 | 3378; 3439 | *** | 21 | A, B, C | 118/190 | ruminant | |
| Cpn_TW-183 | 8759 | 21 | B, C | 123/172 | human | |||
| Cmu_Nigg | 82,115 | 3219; 3336; 3256 | 15 | A, B, X | 125/207 | rodent | ||
| Csu_1-25a | 82,505 | 3363; 3225 | 3 | 9 | A, B, C, D, E, F, G | 126/203 | porcine | |
| Ctr_D-UW-3-CX | 55,445 | 3 | 9 | A, B, C, D, E, F, G, V | 125/201 | human |
* no. of genes, ** truncated, X, Y unassigned to subtype (Y also designated NC), *** strain E58 has Trp operon outside PZ (ref. 1).