Table 1.
Primers used in this study.
Assay ID | Reporter Dye | Context Sequence | Gene Symbol | Gene Name | Species | NCBI Gene Reference |
---|---|---|---|---|---|---|
Mm00545794_m1 | FAM | 5′-CTCAGAAGAAGTTCCAGACCATGAC-3′ | Acan | aggrecan | Mus musculus |
NM_007424.2 L07049.1 |
Mm00476090_m1 | FAM | 5′-TCTACTGCTTCCGAGACTCTGCCCA-3′ | Bcan | brevican | Mus musculus |
NM_007529.2 NM_001109758.1 X87096.1 BC052032.1 AK144405.1 |
Mm00484007_m1 | FAM | 5′-AGGAAGATCCCACAGATCCCTGCGA-3′ | Ncan | neurocan | Mus musculus |
NM_007789.3 X84727.1 BC065118.1 |
Mm01283063_m1 | FAM | 5′-CACTGGCTGTGGATGGTGTTGTGTT-3′ | Vcan | versican | Mus musculus |
NM_172955.1 NM_001134474.1 NM_001134475.1 NM_019389.2 NM_001081249.1 D28599.1 D32040.1 D16263.1 BC021652.1 AK014525.1 AK034871.1 BC096495.1 AK135324.1 AK163927.1 AK165069.1 |
Mm00478484_m1 | FAM | 5′-GTCCTACACAGGAGCACTAAATCAA-3′ | Ptprz1 (Pcan) |
protein tyrosine phosphatase, receptor type Z, polypeptide 1 (Phosphacan) |
Mus musculus |
NM_001081306.1 AJ133130.1 AK081698.1 BC157965.1 BC151071.1 |
Mm01179833_m1 | FAM | 5′-AAGGAGGTGCTCGTAGCCGTGATCG-3′ | Sdc3 | syndecan 3 | Mus musculus |
NM_011520.3 BC054795.1 AK129153.1 BC062093.1 AK150120.1 AK155127.1 |
Mm99999915_g1 | FAM | 5′-GGTGTGAACGGATTTGGCCGTATTG-3′ | Gapdh | glyceraldehyde-3-phosphate dehydrogenase | Mus musculus |
NM_008084.2 M32599.1 BC082592.1 BC083079.1 BC083080.1 BC083065.1 BC083149.1 BC085315.1 BC085274.1 BC085275.1 AK191938.1 AK192040.1 AK201736.1 BC091768.1 BC092252.1 BC092264.1 BC092294.1 BC093508.1 BU5 |