Table 1.
Nucleotide diversity and neutral test at CYP6P9a.
| 2n | S | h | hd | π | D | D * | FS | |
|---|---|---|---|---|---|---|---|---|
| Complete sequence fragment (1139 bp) | ||||||||
| Mozambique_Palmeira | 20 | 1 | 2 | 0.10 | 0.00009 | −1.16 | −1.54 | −0.88 |
| Mozambique_Magania | 32 | 3 | 3 | 0.12 | 0.00016 | −1.73 | −2.73 * | −1.71 |
| Mozambique | 52 | 4 | 4 | 0.11 | 0.00014 | −1.86 * | −3.43 ** | −3.63 * |
| Malawi | 28 | 7 | 8 | 0.59 | 0.00061 | −1.84 * | −1.46 | −5.83 ** |
| Zambia | 20 | 3 | 3 | 0.28 | 0.00042 | −1.16 | −0.12 | −0.29 |
| Tanzania_Muheza | 16 | 3 | 3 | 0.24 | 0.00033 | −1.70 | −2.20 | −0.90 |
| Tanzania_Tulizamoyo | 24 | 3 | 3 | 0.24 | 0.00035 | −1.26 | −0.19 | −0.50 |
| Tanzania_Ikwambi | 18 | 1 | 2 | 0.11 | 0.00010 | −1.16 | −1.50 | −0.79 |
| Tanzania | 58 | 7 | 6 | 0.20 | 0.00027 | −2.05 * | −2.77 * | −4.89 * |
| Uganda | 18 | 9 | 6 | 0.56 | 0.00105 | −1.92 * | −2.11 | −1.91 |
| DR Congo | 26 | 24 | 9 | 0.53 | 0.00200 | −2.33 ** | −2.90 ** | −2.04 |
| Cameroon | 20 | 23 | 7 | 0.68 | 0.00304 | −1.79 | −1.93 | 0.44 |
| Overall | 222 | 84 | 39 | 0.61 | 0.01095 | −0.42 | −3.96 ** | −0.53 |
| Coding Region (642 bp) | ||||||||
| Mozambique_Palmeira | 20 | 1 | 2 | 0.10 | 0.00016 | −1.16 | −1.54 | −0.88 |
| Mozambique_Magania | 32 | 3 | 3 | 0.12 | 0.00029 | −1.73 | −2.73 * | −1.71 |
| Mozambique | 52 | 4 | 4 | 0.11 | 0.00024 | −1.86 * | −3.43 * | −3.63 * |
| Malawi | 28 | 2 | 3 | 0.27 | 0.00043 | −0.97 | 0.82 | −1.09 |
| Zambia | 20 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Tanzania_Muheza | 16 | 3 | 3 | 0.24 | 0.00058 | −1.70 | −2.20 | −0.90 |
| Tanzania_Tulizamoyo | 24 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Tanzania_Ikwambi | 18 | 1 | 2 | 0.11 | 0.00017 | −1.16 | −1.50 | −0.79 |
| Tanzania | 58 | 4 | 4 | 0.10 | 0.00021 | −1.85 * | −3.51 ** | -3.84 * |
| Uganda | 18 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| DR Congo | 26 | 6 | 4 | 0.22 | 0.00083 | −1.96 * | −2.52 * | −1.19 |
| Cameroon | 20 | 16 | 6 | 0.62 | 0.00403 | −1.58 | −1.37 | 0.47 |
| Overall | 222 | 41 | 20 | 0.54 | 0.01328 | 0.54 | −2.42 * | 4.08 * |
| Non-Coding Region (497 bp) | ||||||||
| Mozambique_Palmeira | 20 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Mozambique_Magania | 32 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Mozambique | 52 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Malawi | 28 | 5 | 6 | 0.39 | 0.00085 | −1.86 * | −2.30 | −4.66 ** |
| Zambia | 20 | 3 | 3 | 0.28 | 0.00096 | −1.16 | −0.12 | −0.29 |
| Tanzania_Muheza | 16 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Tanzania_Tulizamoyo | 24 | 3 | 3 | 0.24 | 0.00081 | −1.26 | −0.19 | -0.50 |
| Tanzania_Ikwambi | 18 | 0 | 1 | 0.00 | 0.00000 | - | - | - |
| Tanzania | 58 | 3 | 3 | 0.10 | 0.00034 | −1.47 | −0.45 | −1.60 |
| Uganda | 18 | 9 | 6 | 0.56 | 0.00242 | −1.92 * | −2.11 | −2.11 |
| DR Congo | 26 | 18 | 8 | 0.47 | 0.00353 | −2.24 ** | −2.61 * | −2.07 |
| Cameroon | 20 | 7 | 6 | 0.45 | 0.00175 | −1.84 * | −2.46 * | −2.70 * |
| Overall | 222 | 43 | 28 | 0.54 | 0.00790 | −1.34 | −4.28 ** | −6.63 ** |
Column headings: 2n: number of sequences; S: segregating sites; h: number of haplotypes; hd: haplotype diversity; π: Nucleotide diversity (Pi); D: Tajima’s D; D*: Fu and Li’s D* statistic; FS: Fu’s FS test. (*) represent significant results and level of significance: * = p ≤ 0.05; ** = p ≤ 0.01.