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. 2020 Nov 5;11(11):1314. doi: 10.3390/genes11111314

Table 3.

Nucleotide diversity and neutral test at CYP6P9a and at 5 loci around it across Africa.

Position (kb) Length (bp) Mozambique Malawi Zambia Tanzania Uganda DR Congo Cameroon Pi
Ratio *
hd π*10E3 D hd π*10E3 D hd π*10E3 D hd π*10E3 D hd π*10E3 D hd π*10E3 D hd π*10E3 D
0BAC −34 626 0.04 0.06 −1.10 0.31 0.72 −1.43 0.22 0.36 −1.22 0.36 1.08 −2.18 ** 0.36 1.76 −1.61 0.15 0.74 −2.09 * 0.91 6.49 −0.80 4.84
25BAC −9 754 0.04 0.14 −1.68 0.38 1.27 −1.24 0.21 0.94 −2.20 ** 0.23 1.28 −1.92 * n.a 0.00 n.a 0.13 0.35 −1.89 * 0.86 5.53 −0.54 1.62
CYP6P9a 0 1139 0.11 0.14 −1.86 * 0.59 0.61 −1.84 * 0.28 0.42 −1.16 0.20 0.27 −2.05 * 0.56 1.05 −1.92 * 0.53 2.00 −2.33 ** 0.68 3.04 −1.79 1.41
63BAC +29 614 0.43 1.11 −0.68 - - - - - - 0.64 1.81 1.05 0.60 1.10 0.18 0.46 1.99 -1.68 * - - - 1.06
95BAC +61 671 0.41 1.24 −1.38 0.20 0.30 −1.51 0.79 1.76 −1.03 0.26 0.74 −1.85 * 0.33 1.19 −1.93 * 0.24 0.62 −1.70 0.85 4.27 −1.66 1.80
120BAC +86 633 0.11 0.17 −0.81 n.a 0.00 n.a 0.07 0.19 −1.49 0.37 4.94 −2.09 * 0.39 2.06 −1.83 * n.a 0.00 n.a 0.46 3.12 −1.76 * 1.37

Column headings: hd: haplotype diversity; π: Nucleotide diversity (Pi); D: Tajima’s D; Pi ratio: ratio between east/central and southern Africa. (*) represent significant results and level of significance: * = p ≤ 0.05; ** = p ≤ 0.01.