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. 2020 Nov 9;8(11):1760. doi: 10.3390/microorganisms8111760

Table 7.

A nested hierarchy of inheritance models was successfully fitted with at least two genes controlling the conidiophore architectural phenotype to the counts of progeny phenotypes from three crosses (Table 5). Nine iterations were necessary to achieve the desired error tolerance of 10−8 with iteratively reweighted least square (IRLS). Recommended models are bolded along with their goodness of fit to the counts of phenotypes in crosses. A null hypothesis (H0) is tested against an alternative (HA) with the chi-squared test having degrees of freedom (df).

Model Χ2 df p X2HA − X2H0 df p for HA vs. H0 Notes
Full epistatic 0.98 2 0.61 - - - H0 = full epistatic
αβ=0 8.39 3 0.04 8.39 − 0.98 = 7.41 1 0.004 H0 = full epistatic
αβ=α=0 25.31 5 0.001 25.31 − 0.98 = 24.33 2 <0.00001 H0 = full epistatic
αβ=β=0 9.96 5 0.08 9.96 − 0.98 = 8.98 2 0.01 H0 = full epistatic
βγ=0 9.32 3 0.02 9.32 − 0.98 = 8.34 1 0.004 H0 = full epistatic
αγ=0 84.57 3 <0.0001 84.57 − 0.98 = 83.59 1 <0.00001 H0 = full epistatic
αβ=βγ=αγ=0
additive
95.76 4 <0.0001 95.76 − 0.98 = 94.78 3 <0.00001 H0 = full epistatic
environmental 124.46 8 <0.0001 124.46 − 0.98 = 123.48 7 <0.00001 H0 = full epistatic
heritability H2 = (124.46 − 95.76)/124.46 = 0.23
H0 = environmental model
H1 = full additive model