Table 2.
Experimental mean initial DNP rates in comparison with average effective distances calculated from Eq. (1.11) and DNP-effective inverse distances 〈r−6〉 between Gd3+ and the side chain 15N system for Arg, His, and Lys in Gd-F4C-Ub, Gd-A28C-Ub and Gd-G75C-Ub. Distances were calculated from structural models as explained in more detail in the text and given for all Gd3+–15N pairs (no cutoff) as well as only including pairs outside a 12 Å cutoff distance.
| no cutoff | 12 Å cutoff | |||||
|---|---|---|---|---|---|---|
| (s−1) | (Å) | 109 〈r−6〉 (Å−6) | (Å) | 109 〈r−6〉 (Å−6) | ||
| Arg | F4C | 13 | 26.85 | 2.7 | 26.85 | 2.7 |
| A28C | 86 | 18.15 | 28.0 | 19.69 | 17.2 | |
| G75C | 236 | 11.01 | 561.4 | 16.50 | 49.5 | |
| His | F4C | 179 | 12.84 | 223.2 | 16.55 | 48.6 |
| A28C | — | 26.32 | 3.0 | 26.32 | 3.0 | |
| G75C | — | 19.23 | 19.8 | 20.52 | 13.4 | |
| Lys | F4C | 175 | 10.13 | 925.4 | 16.86 | 43.5 |
| A28C | 130 | 12.95 | 212.0 | 18.07 | 28.7 | |
| G75C | 44 | 19.23 | 19.8 | 21.93 | 9.0 | |