Table 1.
vRNA Segment |
Nucleotide Region | Predicted Structure | Publication | |
---|---|---|---|---|
(+) Sense Numbering |
(−) Sense Numbering |
|||
1 | 1823–1944 | 398–519 | motif with long helical regions and two hairpins | [41] |
2 | 289–309 | 2033–2053 | hairpin | [19] |
497–561 | 1781–1845 | hairpin | [41] | |
5 | 16–39 | 1527–1550 | hairpin | [9,25,33] |
22–68 | 1498–1544 | two hairpins | [41] | |
70–82 | 1484–1496 | hairpin | [9,19,25] | |
89–105 | 1461–1477 | hairpin | [33] | |
191–203 | 1363–1375 | hairpin | [9,25] | |
580–590 | 976–986 | hairpin | [9,25,33] | |
922–938 | 628–644 | hairpin | [33] | |
1090–1106 | 460–476 | hairpin | [9,25] | |
1144–1160 | 406–422 | hairpin | [9,25] | |
1431–1479 | 87–135 | hairpin/pseudoknot | [9,19,25,33,41,42] | |
1476–1530 | 36–90 | hairpin | [33] | |
7 | 21–63 | 965–1007 | dynamic | [16,26] |
219–240 | 788–809 | hairpin | [9,26,39] | |
249–260 | 768–779 | hairpin | [9,26] | |
318–333 | 695–710 | hairpin | [9,26] | |
443–450 | 578–585 | hairpin | [9,26] | |
671–691 | 337–357 | hairpin | [9,26] | |
857–890 | 138–171 | hairpin | [9,26] | |
967–994 | 34–61 | hairpin | [9,16,26,34,36,39,43,44] | |
8 | 22–86 | 790–854 | hairpin | [41] |
96–101/175–180 | 696–701/775–780 | helix | [24,38] | |
109–118/163–172 | 704–713/758–767 | helix | [24,38] | |
128–140 | 736–748 | hairpin | [24,38] | |
257–277 | 599–619 | hairpin | [19] | |
529–534/578–583 | 293–298/342–347 | helix | [9,24] | |
549–564 | 312–327 | hairpin | [9,24] | |
588–615 | 261–288 | hairpin | [9,24] |