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. 2020 Nov 14;12(11):1094. doi: 10.3390/pharmaceutics12111094

Table 1.

Primer sequences and real-time PCR conditions used for gut microbiota analysis.

Bacterial Group Primer Sequence (5′-3′) PCR Product Size (bp) AT (°C)
Firmicutes ATG TGG TTT AAT TCG AAG CA 126 45
AGC TGA CGA CAA CCA TGC AC
Bacteroidetes CAT GTG GTT TAA TTC GAT GAT 126 45
AGC TGA CGA CAA CCA TGC AG
Clostridium GCA CAA GCA GTG GAG T 239 45
CTT CCT CCG TTT TGT CAA
Bacteroides ATA GCC TTT CGA AAG RAA GAT 495 45
CCA GTA TCA ACT GCA ATT TTA
Universal AAA CTC AAA KGA ATT GAC GG 180 45
CTC ACR RCA CGA GCT GAC
Enterococcus CCC TTA TTG TTA GTT GCC GCC ATC ATT 144 50
ACTCGT TGT ACT TCC CT TGT
Prevotella CAC RGT AAA CGA TGG ATG CC 513 50
GGT CGG GTT GCA GAC C
Bifidobacterium CGC GTC YGG TGT GAA AG 244 50
CCC CAC ATC CAG CAT CCA
Roseburia TAC TGC ATT GGA AAC TGT CG 230 50
CGG CAC CGA AGA GCA AT
Lactobacillus GAG GCA GCA GTA GGG AAT CTT C 126 55
GGC CAG TTA CTA CCT CTA TCC TTC TTC
Akkermansia CAG CAC GTG AAG GTG GGG AC 327 55
CCT TGC GGT TGG CTT CAG AT

Abbreviations: AT, annealing temperature; bp, base pairs; PCR, polymerase chain reaction.