Table 1.
Bacterial Group | Primer Sequence (5′-3′) | PCR Product Size (bp) | AT (°C) |
---|---|---|---|
Firmicutes | ATG TGG TTT AAT TCG AAG CA | 126 | 45 |
AGC TGA CGA CAA CCA TGC AC | |||
Bacteroidetes | CAT GTG GTT TAA TTC GAT GAT | 126 | 45 |
AGC TGA CGA CAA CCA TGC AG | |||
Clostridium | GCA CAA GCA GTG GAG T | 239 | 45 |
CTT CCT CCG TTT TGT CAA | |||
Bacteroides | ATA GCC TTT CGA AAG RAA GAT | 495 | 45 |
CCA GTA TCA ACT GCA ATT TTA | |||
Universal | AAA CTC AAA KGA ATT GAC GG | 180 | 45 |
CTC ACR RCA CGA GCT GAC | |||
Enterococcus | CCC TTA TTG TTA GTT GCC GCC ATC ATT | 144 | 50 |
ACTCGT TGT ACT TCC CT TGT | |||
Prevotella | CAC RGT AAA CGA TGG ATG CC | 513 | 50 |
GGT CGG GTT GCA GAC C | |||
Bifidobacterium | CGC GTC YGG TGT GAA AG | 244 | 50 |
CCC CAC ATC CAG CAT CCA | |||
Roseburia | TAC TGC ATT GGA AAC TGT CG | 230 | 50 |
CGG CAC CGA AGA GCA AT | |||
Lactobacillus | GAG GCA GCA GTA GGG AAT CTT C | 126 | 55 |
GGC CAG TTA CTA CCT CTA TCC TTC TTC | |||
Akkermansia | CAG CAC GTG AAG GTG GGG AC | 327 | 55 |
CCT TGC GGT TGG CTT CAG AT |
Abbreviations: AT, annealing temperature; bp, base pairs; PCR, polymerase chain reaction.