Table 5. Transition and transversion rate of chloroplast tRNA.
In all of the chloroplast tRNAs, the average transition rate (shown in bold value) was slightly higher than the average transversion rate, thereby indicating that chloroplast tRNAs have unequal substitution rates.
| From/To | A | U | C | G | From/To | A | U | C | G |
|---|---|---|---|---|---|---|---|---|---|
| Alanine | lysine | ||||||||
| A | – | 12.50 | 12.50 | 0.00 | A | – | 1.47 | 1.47 | 22.06 |
| U | 12.50 | – | 0.00 | 12.50 | U | 1.47 | – | 22.06 | 1.47 |
| C | 12.50 | 0.00 | – | 12.50 | C | 1.47 | 22.06 | – | 1.47 |
| G | 0.00 | 12.50 | 12.50 | – | G | 22.06 | 1.47 | 1.47 | – |
| Arginine | Methionine | ||||||||
| A | – | 2.93 | 2.93 | 19.13 | A | – | 3.86 | 3.86 | 17.27 |
| U | 2.93 | – | 19.13 | 2.93 | U | 3.86 | – | 17.27 | 3.86 |
| C | 2.93 | 19.13 | – | 2.93 | C | 3.86 | 17.27 | – | 3.86 |
| G | 19.13 | 2.93 | 2.93 | – | G | 17.27 | 3.86 | 3.86 | – |
| Asparagine | Phenylalanine | ||||||||
| A | – | 1.12 | 1.12 | 22.75 | A | – | 1.21 | 1.21 | 22.58 |
| U | 1.12 | – | 22.75 | 1.12 | U | 1.21 | – | 22.58 | 1.21 |
| C | 1.12 | 22.75 | – | 1.12 | C | 1.21 | 22.58 | – | 1.21 |
| G | 22.75 | 1.12 | 1.12 | – | G | 22.58 | 1.21 | 1.21 | – |
| Aspartate | Proline | ||||||||
| A | – | 0.00 | 0.00 | 25.00 | A | – | 1.53 | 1.53 | 21.95 |
| U | 0.00 | – | 25.00 | 0.00 | U | 1.53 | – | 21.95 | 1.53 |
| C | 0.00 | 25.00 | – | 0.00 | C | 1.53 | 21.95 | – | 1.53 |
| G | 25.00 | 0.00 | 0.00 | – | G | 21.95 | 1.53 | 1.53 | – |
| Cysteine | Serine | ||||||||
| A | – | 2.75 | 2.75 | 19.50 | A | – | 5.16 | 5.16 | 14.68 |
| U | 2.75 | – | 19.50 | 2.75 | U | 5.16 | – | 14.68 | 5.16 |
| C | 2.75 | 19.50 | – | 2.75 | C | 5.16 | 14.68 | – | 5.16 |
| G | 19.50 | 2.75 | 2.75 | – | G | 14.68 | 5.16 | 5.16 | – |
| Glutamine | Threonine | ||||||||
| A | – | 3.83 | 3.83 | 17.35 | A | – | 3.91 | 3.91 | 17.18 |
| U | 3.83 | – | 17.35 | 3.83 | U | 3.91 | – | 17.18 | 3.91 |
| C | 3.83 | 17.35 | – | 3.83 | C | 3.91 | 17.18 | – | 3.91 |
| G | 17.35 | 3.83 | 3.83 | – | G | 17.18 | 3.91 | 3.91 | – |
| Glutamate | Ttyptophan | ||||||||
| A | – | 4.59 | 4.59 | 15.81 | A | – | 2.02 | 2.02 | 20.96 |
| U | 4.59 | – | 15.81 | 4.59 | U | 2.02 | – | 20.96 | 2.02 |
| C | 4.59 | 15.81 | – | 4.59 | C | 2.02 | 20.96 | – | 2.02 |
| G | 15.81 | 4.59 | 4.59 | – | G | 20.96 | 2.02 | 2.02 | – |
| Glycine | Tyrosine | ||||||||
| A | – | 1.94 | 1.94 | 21.13 | A | – | 5.34 | 5.34 | 14.33 |
| U | 1.94 | – | 21.13 | 1.94 | U | 5.34 | – | 14.33 | 5.34 |
| C | 1.94 | 21.13 | – | 1.94 | C | 5.34 | 14.33 | – | 5.34 |
| G | 21.13 | 1.94 | 1.94 | – | G | 14.33 | 5.34 | 5.34 | – |
| Histidine | Valine | ||||||||
| A | – | 1.22 | 1.22 | 22.56 | A | – | 1.73 | 1.73 | 21.54 |
| U | 1.22 | – | 22.56 | 1.22 | U | 1.73 | – | 21.54 | 1.73 |
| C | 1.22 | 22.56 | – | 1.22 | C | 1.73 | 21.54 | – | 1.73 |
| G | 22.56 | 1.22 | 1.22 | – | G | 21.54 | 1.73 | 1.73 | – |
| Isoleucine | Overrall | ||||||||
| A | – | 4.72 | 4.72 | 15.56 | A | – | 4.81 | 4.81 | 15.38 |
| U | 4.72 | – | 15.56 | 4.72 | U | 4.81 | – | 15.38 | 4.81 |
| C | 4.72 | 15.56 | – | 4.72 | C | 4.81 | 15.38 | – | 4.81 |
| G | 15.56 | 4.72 | 4.72 | – | G | 15.38 | 4.81 | 4.81 | – |
| Leucine | |||||||||
| From/To | A | U | C | G | |||||
| A | – | 4.40 | 4.40 | 16.21 | |||||
| U | 4.40 | – | 16.21 | 4.40 | |||||
| C | 4.40 | 16.21 | – | 4.40 | |||||
| G | 16.21 | 4.40 | 4.40 | ||||||