Table 2.

Differentially Expressed Genes Involved in the Interferon-γ Signaling Pathway Enriched in the Cerebral Organoids (Top 50 Genes According to Log-Fold Change)

DEGs involved in INF-γ signaling	log2(fold_change)	P_value	q_value
OAS1	−6.90769	0.001	0.00604584
CASP4	−6.83424	0.01125	0.0398559
TNFSF10	−6.77556	5.00E-05	0.00048351
TNFAIP2	−6.73353	5.00E-05	0.00048351
IRF6	−6.65312	5.00E-05	0.00048351
PTGS2	−6.52324	5.00E-05	0.00048351
MX2	−6.42068	0.0001	0.00089722
XAF1	−6.23497	5.00E-05	0.00048351
EPSTI1	−6.208	5.00E-05	0.00048351
OAS2	−5.82765	0.00095	0.00580028
CD86	−5.70638	5.00E-05	0.00048351
CD40	−5.67515	5.00E-05	0.00048351
CSF2RB	−5.62625	0.0049	0.0211191
PTAFR	−5.59098	5.00E-05	0.00048351
HLA-DRB1	−5.588	0.01485	0.049126
SPI1	−5.44754	0.00015	0.00127748
PTPN6	−5.26556	5.00E-05	0.00048351
SP100	−4.99225	5.00E-05	0.00048351
SECTM1	−4.91541	0.00245	0.0122938
DHX58	−4.40773	5.00E-05	0.00048351
MX1	−4.3122	5.00E-05	0.00048351
IL4R	−4.23393	0.0004	0.00287947
MYD88	−4.17387	5.00E-05	0.00048351
OASL	−4.11462	0.00385	0.0174379
HLA-DRB1	−4.09116	0.001	0.00604584
CMKLR1	−4.08248	0.0016	0.00880692
IFI30	−3.89748	5.00E-05	0.00048351
FCGR1A	−3.89359	0.0014	0.00794668
IL15RA	−3.83344	5.00E-05	0.00048351
CD74	−3.83166	5.00E-05	0.00048351
PLA2G4A	−3.82071	0.00965	0.0356166
OAS3	−3.79986	5.00E-05	0.00048351
CDHR5	−3.74691	5.00E-05	0.00048351
NMI	−3.61544	5.00E-05	0.00048351
CFH	−3.60805	0.00375	0.0170959
CDHR5	−3.6023	5.00E-05	0.00048351
IL10RA	−3.51981	0.0001	0.00089722
FGL2	−3.45642	5.00E-05	0.00048351
IL6	−3.40759	0.0115	0.0405358
CASP8	−3.3689	0.01025	0.037159
PARP12	−3.20967	5.00E-05	0.00048351
GBP2	−3.19186	5.00E-05	0.00048351
BATF2	−3.10439	5.00E-05	0.00048351
TNFAIP3	−3.06798	5.00E-05	0.00048351
PRKCD	−2.80091	5.00E-05	0.00048351
ISG20	−2.79392	5.00E-05	0.00048351
ICAM1	−2.67642	5.00E-05	0.00048351
TRIM14	−2.61415	5.00E-05	0.00048351
GPR18	−2.61336	0.00325	0.0153001