| HNSCC | Head and neck squamous cell carcinoma |
| AUC | Area under the receiver operating curve |
| HPV | Human papillomavirus |
| AN | Adjacent normal |
| ORF | Open reading frame |
| OUT | Operational taxonomic unit |
| ASV | amplicon sequence variant |
| PERMANOVA | Permutational multivariate analysis of variance |
| MWU | Mann–Whitney Wilcoxon rank sum test |
| WSR | Wilcoxon signed rank test |
| KW | Kruskal–Wallis test |
| Tukey HSD | Tukey’s honest significant difference |
| ROC | Receiver operating characteristic |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| KO | Kyoto Encyclopedia of Genes and Genomes Orthology |
| FFPE | Formalin-fixed paraffin-embedded |
| DMRs | Differentially methylated regions |
| TCGA | The cancer genome atlas |
| HR | High risk |
| PCoA | Principal coordinate analysis |
| LefSe | Linear discriminant analysis effect size |
| LDA | Linear discriminant analysis |
| PICRUSt2 | Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2 |
| DSS | Disease specific survival |
| DFS | Disease free survival |
| ISH | In situ hybridization |
| Glm nb | generalized linear regression model test |
| TSG | tumor suppressor gene |
| LXN | Latexin |
| qPCR | Quantitative PCR |
| F-Low | Fusobacterium-low |
| F-High | Fusobacterium-high |