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. 2020 Nov 18;12(11):3425. doi: 10.3390/cancers12113425
HNSCC Head and neck squamous cell carcinoma
AUC Area under the receiver operating curve
HPV Human papillomavirus
AN Adjacent normal
ORF Open reading frame
OUT Operational taxonomic unit
ASV amplicon sequence variant
PERMANOVA Permutational multivariate analysis of variance
MWU Mann–Whitney Wilcoxon rank sum test
WSR Wilcoxon signed rank test
KW Kruskal–Wallis test
Tukey HSD Tukey’s honest significant difference
ROC Receiver operating characteristic
KEGG Kyoto Encyclopedia of Genes and Genomes
KO Kyoto Encyclopedia of Genes and Genomes Orthology
FFPE Formalin-fixed paraffin-embedded
DMRs Differentially methylated regions
TCGA The cancer genome atlas
HR High risk
PCoA Principal coordinate analysis
LefSe Linear discriminant analysis effect size
LDA Linear discriminant analysis
PICRUSt2 Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2
DSS Disease specific survival
DFS Disease free survival
ISH In situ hybridization
Glm nb generalized linear regression model test
TSG tumor suppressor gene
LXN Latexin
qPCR Quantitative PCR
F-Low Fusobacterium-low
F-High Fusobacterium-high