Figure 5.

Phylogenetic tree of HPV58 variants from French Guiana. Maximum likelihood phylogenetic tree of HPV58 variants based on 741 bp of E6 and E7 concatenated sequences. Four clusters were identified as lineages A, B, C, and D. Only bootstrap values above 70% are represented in the branches. The tree is drawn to scale with branch lengths measured in the number of substitutions per site. Newly generated sequences, here identified by their IDs, are color-coded according to the mother tongue of the women from whom they were obtained. Oversized sequences in bold and in italics are those obtained from women with an abnormal cytology (either ASCUS, ASC-H, LSIL, HSIL, or glandular anomalies).