Table 1.
List of SARS-CoV proteins used for antigenicity prediction using VaxiJen server. The antigenic proteins with Antigenicity Score ≥ 0.4 were taken for epitope screening.
| NCBI accession number | SARS-CoV-2 proteins | Antigenicity score | Antigenicity prediction | |
|---|---|---|---|---|
| QHD43415_1 | ORF1ab | Host translation inhibitor (nsp1) | 0.4064 | Probable ANTIGEN |
| QHD43415_2 | Non-structural protein 2 (nsp2) | 0.4034 | Probable ANTIGEN | |
| QHD43415_3 | Papain-like proteinase | 0.5142 | Probable ANTIGEN | |
| QHD43415_4 | Non-structural protein 4 (nsp4) | 0.4575 | Probable ANTIGEN | |
| QHD43415_5 | Proteinase | 0.4159 | Probable ANTIGEN | |
| QHD43415_6 | Non-structural protein 6 (nsp6) | 0.5813 | Probable ANTIGEN | |
| QHD43415_7 | Non-structural protein 7 (nsp7) | 0.4167 | Probable ANTIGEN | |
| QHD43415_8 | Non-structural protein 8 (nsp8) | 0.4008 | Probable ANTIGEN | |
| QHD43415_9 | Non-structural protein 9 (nsp9) | 0.6476 | Probable ANTIGEN | |
| QHD43415_1 | Non-structural protein 10 (nsp10) | 0.4039 | Probable ANTIGEN | |
| QHD43415_1 | RNA-directed RNA polymerase (RdRp) | 0.4064 | Probable ANTIGEN | |
| QHD43415_1 | Helicase (Hel) | 0.448 | Probable ANTIGEN | |
| QHD43415_1 | Guanine-N7 methyltransferase (ExoN) | 0.4138 | Probable ANTIGEN | |
| QHD43415_1 | Uridylate-specific endoribonuclease (NendoU) | 0.5554 | Probable ANTIGEN | |
| QHD43415_1 | 2’-O-methyltransferase (2’-O-MT) | 0.38 | Probable NON-ANTIGEN | |
| QHD43416 | Surface glycoprotein | 0.4646 | Probable ANTIGEN | |
| QHD43417 | ORF3a | 0.4945 | Probable ANTIGEN | |
| QHD43418 | ORF4 (E Protein) | 0.6025 | Probable ANTIGEN | |
| QHD43419 | Membrane Protein | 0.5102 | Probable ANTIGEN | |
| QHD43420 | ORF6 | 0.6131 | Probable ANTIGEN | |
| QHD43421 | ORF7a | 0.6441 | Probable ANTIGEN | |
| QHD43422 | ORF8 | 0.6502 | Probable ANTIGEN | |
| QHD43423 | Nucleocapsid Protein | 0.5059 | Probable ANTIGEN | |
| QHI42199 | ORF10 | 0.7185 | Probable ANTIGEN | |