Table 2. Correlation analysis between YTHDC2 and related genes and markers of immune cells in TIMER.
| Description | Gene markers | HNSCC | |||
|---|---|---|---|---|---|
| None | Purity | ||||
| Cor | P | Cor | P | ||
| CD8+ T cell | CD8A | 0.349 | *** | 0.352 | *** |
| CD8B | 0.262 | *** | 0.253 | *** | |
| T cell (general) | CD3D | 0.236 | *** | 0.228 | *** |
| CD3E | 0.334 | *** | 0.337 | *** | |
| CD2 | 0.323 | *** | 0.319 | *** | |
| B cell | CD19 | 0.285 | *** | 0.287 | *** |
| CD79A | 0.309 | *** | 0.314 | *** | |
| Monocyte | CD86 | 0.244 | *** | 0.244 | *** |
| CSF1R | 0.299 | *** | 0.301 | *** | |
| TAM | CCL2 | 0.271 | *** | 0.254 | *** |
| CD68 | 0.090 | 0.04 | 0.086 | 0.058 | |
| IL10 | 0.265 | *** | 0.266 | *** | |
| M1 Macrophage | NOS2 | 0.337 | *** | 0.331 | *** |
| IRF5 | 0.258 | *** | 0.263 | *** | |
| PTGS2 | 0.130 | * | 0.129 | * | |
| M2 Macrophage | CD163 | 0.276 | *** | 0.284 | *** |
| VSIG4 | 0.196 | *** | 0.196 | *** | |
| MS4A4A | 0.215 | *** | 0.213 | *** | |
| Neutrophils | CEACAM8 | 0.046 | 0.293 | 0.045 | 0.321 |
| ITGAM | 0.319 | *** | 0.317 | *** | |
| CCR7 | 0.320 | *** | 0.314 | *** | |
| Natural killer cell | KIR2DL1 | 0.145 | ** | 0.161 | ** |
| KIR2DL3 | 0.247 | *** | 0.243 | *** | |
| KIR2DL4 | 0.275 | *** | 0.298 | *** | |
| KIR3DL1 | 0.275 | *** | 0.289 | *** | |
| KIR3DL2 | 0.277 | *** | 0.276 | *** | |
| KIR3DL3 | 0.134 | * | 0.120 | * | |
| KIR2DS4 | 0.132 | * | 0.135 | * | |
| Dendritic cell | HLA-DPB1 | 0.238 | *** | 0.236 | *** |
| HLA-DQB1 | 0.222 | *** | 0.207 | *** | |
| HLA-DRA | 0.322 | *** | 0.324 | *** | |
| HLA-DPA1 | 0.342 | *** | 0.340 | *** | |
| CD1C | 0.254 | *** | 0.242 | *** | |
| NRP1 | 0.300 | *** | 0.305 | *** | |
| ITGAX | 0.293 | *** | 0.308 | *** | |
| Th1 | TBX21 | 0.300 | *** | 0.300 | *** |
| STAT4 | 0.290 | *** | 0.285 | *** | |
| STAT1 | 0.350 | *** | 0.354 | *** | |
| IFN-γ (IFNG) | 0.276 | *** | 0.280 | *** | |
| TNF-α (TNF) | 0.147 | ** | 0.156 | ** | |
| Th2 | GATA3 | 0.190 | *** | 0.182 | *** |
| STAT6 | 0.460 | *** | 0.461 | *** | |
| STAT5A | 0.320 | *** | 0.315 | *** | |
| IL13 | 0.199 | *** | 0.192 | *** | |
| Tfh | BCL6 | 0.363 | *** | 0.369 | *** |
| IL21 | 0.352 | *** | 0.335 | *** | |
| Th17 | STAT3 | 0.573 | *** | 0.564 | *** |
| IL17A | 0.277 | *** | 0.268 | *** | |
| Treg | FOXP3 | 0.422 | *** | 0.431 | *** |
| CCR8 | 0.519 | *** | 0.521 | *** | |
| CD4 | 0.344 | *** | 0.344 | *** | |
| CD25 (IL-2Rα) | 0.360 | *** | 0.372 | *** | |
| STAT5B | 0.408 | *** | 0.407 | *** | |
| Th9 | IRF4 | 0.392 | *** | 0.399 | *** |
| PU.1 (SPL1) | 0.234 | *** | 0.238 | *** | |
| Th22 | IL22 | 0.167 | ** | 0.155 | ** |
| FOXO4 | 0.425 | *** | 0.422 | *** | |
| AHR | 0.329 | *** | 0.329 | *** | |
| CD196 (CCR6) | 0.401 | *** | 0.404 | *** | |
| CD194 (CCR4) | 0.498 | *** | 0.496 | *** | |
Notes.
P < 0.05.
P < 0.01.
P < 0.001.