Table 1.
Chromosome | Region (kbp) | SNP 1 | Hetero sires 2 | Hetero dams 3 | Frequency (%) | AB 4 × AA | AB × BB | AB × AB | TRD effects 6 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AA 5 | AB | AB | BB | AA | AB | BB | α | α s | α d | ||||||
1 | 173 127–173 367 | 10 | 17 | 360 | 4.54 | 0 | 0 | 641 | 1688 | 1 | 5 | 15 | −0.23 | −0.33 | −0.23 |
2 | 71 543–71 622 | 4 | 21 | 305 | 2.93 | 0 | 0 | 397 | 1664 | 0 | 7 | 2 | −0.31 | −0.21 | −0.32 |
2 | 99 815–99 884 | 4 | 67 | 384 | 4.44 | 0 | 0 | 654 | 1915 | 0 | 27 | 39 | −0.25 | −0.25 | −0.25 |
5 | 36 746–36 854 | 4 | 15 | 262 | 2.77 | 0 | 0 | 403 | 1505 | 0 | 2 | 3 | −0.29 | −0.31 | −0.29 |
6 | 50 141–50 184 | 4 | 22 | 182 | 1.37 | 0 | 0 | 146 | 1242 | 0 | 1 | 11 | −0.40 | −0.44 | −0.39 |
7 | 10 128–10 171 | 4 | 61 | 277 | 2.66 | 0 | 0 | 342 | 1344 | 0 | 14 | 42 | −0.31 | −0.26 | −0.32 |
10 | 10 424–10 465 | 4 | 15 | 235 | 2.34 | 0 | 0 | 327 | 1338 | 0 | 5 | 6 | −0.31 | −0.38 | −0.30 |
11 | 15 529–15 551 | 4 | 25 | 410 | 4.41 | 0 | 0 | 639 | 2157 | 0 | 10 | 22 | −0.28 | −0.16 | −0.29 |
14 | 16 726–16 743 | 4 | 32 | 287 | 2.96 | 0 | 0 | 383 | 1557 | 0 | 9 | 9 | −0.31 | −0.31 | −0.31 |
16 | 10 429–10 450 | 4 | 95 | 457 | 8.21 | 4 | 15 | 1136 | 2025 | 34 | 189 | 145 | −0.15 | −0.03 | −0.22 |
23 | 69–81 | 4 | 27 | 92 | 1.31 | 0 | 0 | 189 | 1271 | 0 | 8 | 30 | −0.38 | −0.42 | −0.30 |
28 | 4507–4549 | 10 | 29 | 264 | 2.8 | 0 | 0 | 372 | 1597 | 0 | 8 | 21 | −0.32 | −0.27 | −0.32 |
Number of SNP in a haplotype window.
Number of heterozygous sires.
Number of heterozygous dams.
Genotypes of parents.
Genotypes of offspring.
α, α s and α d are overall, sire and dam allelic transmission ratio distortion respectively.