Table 2.
Chr 1 | Region (Kbp) | SNP 2 | Hetero sires 3 | Hetero dams 4 | Frequency (%) | AB 5 × AA | AB × BB | AB × AB | TRD effects 7 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AA 6 | AB | AB | BB | AA | AB | BB | α g | δ g | ||||||
1 | 27 680–27 924 | 10 | 24 | 101 | 2.51 | 0 | 0 | 450 | 447 | 0 | 17 | 10 | −0.58 | 0.29 |
1 | 29 253–29 484 | 10 | 30 | 108 | 4.33 | 0 | 0 | 305 | 265 | 0 | 20 | 11 | −0.54 | 0.35 |
2 | 40 083–40 199 | 4 | 13 | 86 | 1.83 | 0 | 0 | 336 | 481 | 0 | 23 | 15 | −0.77 | 0.14 |
3 | 29 955–30 188 | 10 | 5 | 39 | 0.67 | 0 | 0 | 106 | 142 | 0 | 15 | 10 | −0.71 | 0.16 |
4 | 60 400–60 941 | 20 | 9 | 64 | 1.93 | 0 | 0 | 252 | 321 | 0 | 32 | 16 | −0.72 | 0.21 |
4 | 65 823–65 908 | 4 | 10 | 48 | 0.91 | 0 | 0 | 153 | 232 | 0 | 20 | 11 | −0.77 | 0.11 |
5 | 3900–3975 | 4 | 50 | 170 | 4.92 | 0 | 0 | 950 | 967 | 0 | 26 | 17 | −0.62 | 0.30 |
6 | 8973–9097 | 10 | 19 | 81 | 2.48 | 0 | 0 | 431 | 458 | 0 | 21 | 11 | −0.63 | 0.27 |
11 | 23 084–23 137 | 4 | 31 | 107 | 3.04 | 0 | 0 | 573 | 673 | 0 | 22 | 12 | −0.67 | 0.23 |
12 | 15 689–15 829 | 20 | 9 | 49 | 1.84 | 0 | 0 | 285 | 304 | 0 | 15 | 10 | −0.61 | 0.26 |
19 | 4054–4196 | 20 | 43 | 156 | 4.39 | 0 | 0 | 763 | 756 | 0 | 62 | 18 | −0.63 | 0.33 |
21 | 9664–9680 | 4 | 38 | 129 | 3.03 | 0 | 0 | 525 | 573 | 0 | 52 | 22 | −0.67 | 0.29 |
24 | 672–742 | 10 | 13 | 54 | 1.86 | 0 | 0 | 323 | 384 | 0 | 17 | 10 | −0.66 | 0.22 |
28 | 1640–1794 | 20 | 20 | 107 | 2.96 | 0 | 0 | 484 | 476 | 0 | 15 | 10 | −0.57 | 0.29 |
Chromosome.
Number of SNP on a haplotype window.
Number of heterozygous sires.
Number of heterozygous dams.
Genotypes of parents.
Genotypes of offspring.
α g and δ g are additive and dominance transmission ratio distortion respectively.