Table 7.
Cytoscape Modules of Target Proteins with Linkers using ReactomeFI App
| Rank | Modules of target proteins with linkers | Top pathway for each module |
|---|---|---|
| 1 | ACTB, CDC42, ELK4, FASN, FYN, IGF1R, IQGAP1, PTPRJ, SETD7, ZNF703 | Adherens junction (KEGG hsa 04520) |
| (Linkers: CCT8, CSNK2A2, CTNNB1, MAPK3, STAT3) | ||
| 2 | BAG6, DYRK1A, EWSR1, H3F3B, KMT2D, SCD, SIN3A | Transcriptional misregulation in cancer (KEGG hsa05202) |
| (Linkers: EP300, HIST1H4A, RXRA) | ||
| 3 | DDX5, HNRNPC, NCL, PCBP2, PRPF8, SCARB2, TCF3 | Processing of capped intron-containing pre-mRNA (Reactome R-HSA-75067) |
| (Linker: HSPA8) | ||
| 4 | ASH1L, DCP2, DYNC1H1, SPOPL, TGFBR1 | Beta5 beta6 beta7 and beta8 integrin cell surface interactions (NCI PID) |
| (Linkers: SUFU, UBC) | ||
| 5 | CCND2, CCNE2, MCM7, RB1 | Cell cycle (KEGG hsa04110) |