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. 2019 Nov 6;36(6):1681–1688. doi: 10.1093/bioinformatics/btz814

Fig. 6.

Fig. 6.

Additional number of reads mapped by Minimap2 with VAPOR pre-classification for 257 real.fastq file pairs. Pre-classification with VAPOR on average resulted in 7816.03 more mapped reads. Several samples gained more than 50 000 reads by choosing a suitable reference. For one sample, representing a possible coinfection, 5221 fewer reads mapped when using a single reference chosen by VAPOR