Table 2.
Dataset | Cells | Sparsity | # Genes | Reference |
---|---|---|---|---|
hgmm | 12 820 | 79% | 3068.5 | 10X Genomics |
ch_pbmc | 15 583 | 98% | 321 | Stoeckius et al. (2018) |
ch_cell-lines | 8191 | 92% | 2086 | Stoeckius et al. (2018) |
demuxlet | 14 619 | 97% | 520 | Kang et al. (2018) |
Notes: The ‘# Genes’ column shows the median number (across cells) of expressed genes. The URL for the hgmm 10X Genomics dataset is https://support.10xgenomics.com/single-cell-gene-expression/datasets-2.1.0/hgmm_12k.