Appendix 2—table 1. Parameters used in the large transport intermediate formation model.
Parameter | Description | Value | Notes | Reference |
---|---|---|---|---|
Membrane tension | 0.003 kBT/nm2 (ER); 0.0012 kBT/nm2 (Golgi membranes) |
Upadhyaya and Sheetz, 2004 | ||
Membrane bending rigidity | 20 kBT | Niggemann et al., 1995 | ||
Radius of curvature of the COPII coat | 37.5 nm | Miller and Schekman, 2013 | ||
Bare coat line tension | 0.012 kBT/nm | Not measured for COPII. Used the clathrin value as a reference | Saleem et al., 2015 | |
COPII coat polymerization energy | 0.024 ± 0.012 kBT/nm2 | Not measured for COPII. Used the clathrin values as a reference | Saleem et al., 2015 | |
TANGO1 filament bending rigidity | 120 kBT nm | Not measured. Range based on standard filament rigidities (see text) | ||
TANGO1 filament spontaneous curvature | (−0.02, 0.02) nm−1 | Not measured. Range based on observed TANGO1 ring sizes | Raote et al., 2017 | |
TANGO1 linactant strength | 0.12 kBT/nm | Not measured. Range based on protein-protein affinity (see text) | - | |
Outwards-directed force | 0 – 5kBT/nm | Not measured. Range based on known intracellular forces | Kovar and Pollard, 2004 (Actin); Block et al., 2003 (Molecular motors) |