species	transcipt name	gene ID	assembly
Astyanax mexicanus	si:dkey-28e7.3-201	ENSAMXG00000018307	Astyanax_mexicanus-2.0 (September 2017)
Astyanax mexicanus	trak1a-201	ENSAMXG00000029426	Astyanax_mexicanus-2.0 (September 2017)
Astyanax mexicanus	trak2-201	ENSAMXG00000012437	Astyanax_mexicanus-2.0 (September 2017)
Callorhinchus milii	si:dkey-28e7.3-202	ENSCMIG00000017409	Callorhinchus_milii-6.1.3 (December 2013)
Callorhinchus milii	trak2-202	ENSCMIG00000009046	Callorhinchus_milii-6.1.3 (December 2013)
Callorhinchus milii	trak1a-202	ENSCMIG00000006222	Callorhinchus_milii-6.1.3 (December 2013)
Cynoglossus semilaevis	Unnamed (listed in tree as C.semilaevis_28e7.3)	ENSCSEG00000006363	Cse_v1.0 (January 2014)
Cynoglossus semilaevis	trak2-201	ENSCSEG00000014003	Cse_v1.0 (January 2014)
Cynoglossus semilaevis	trak1a-201	ENSCSEG00000003758	Cse_v1.0 (January 2014)
Danio rerio	si:dkey-28e7.3-201	ENSDARG00000074508	GRCz11 (May 2017)
Danio rerio	trak2-201	ENSDARG00000102471	GRCz11 (May 2017)
Danio rerio	trak1a-202	ENSDARG00000041304	GRCz11 (May 2017)
Esox lucius	si:dkey-28e7.3-201	ENSELUG00000009890	Eluc_v4 (April 2019)
Esox lucius	trak2-202	ENSELUG00000002196	Eluc_v4 (April 2019)
Esox lucius	trak1a-204	ENSELUG00000004615	Eluc_v4 (April 2019)
Fundulus heteroclitus	si:dkey-28e7.3-202	ENSFHEG00000001760	Fundulus_heteroclitus-3.0.2 (January 2015)
Fundulus heteroclitus	trak2-201	ENSFHEG00000007156	Fundulus_heteroclitus-3.0.2 (January 2015)
Fundulus heteroclitus	trak1a-201	ENSFHEG00000016654	Fundulus_heteroclitus-3.0.2 (January 2015)
Gasterosteus aculeatus	si:dkey-28e7.3-201	ENSGACG00000018327	BROAD S1 (February 2006)
Gasterosteus aculeatus	trak1a-201	ENSGACG00000006003	BROAD S1 (February 2006)
Gasterosteus aculeatus	trak2-201	ENSGACG00000014156	BROAD S1 (February 2006)
Haplochromis burtoni	si:dkey-28e7.3-201	ENSHBUG00000000586	AstBur1.0 (December 2011)
Haplochromis burtoni	trak1a-203	ENSHBUG00000011007	AstBur1.0 (December 2011)
Haplochromis burtoni	trak2-202	ENSHBUG00000016106	AstBur1.0 (December 2011)
Larimichthys crocea	si:dkey-28e7.3-202	ENSLCRG00005003733	L_crocea_2.0 (November 2018)
Larimichthys crocea	trak2-203	ENSLCRG00005003901	L_crocea_2.0 (November 2018)
Larimichthys crocea	trak1a-204	ENSLCRG00005020918	L_crocea_2.0 (November 2018)
Latimeria chalumnae	si:dkey-28e7.3-201	ENSLACG00000007300	LatCha1 (September 2011)
Latimeria chalumnae	trak2-201	ENSLACG00000006273	LatCha1 (September 2011)
Latimeria chalumnae	trak1-201	ENSLACG00000001844	LatCha1 (September 2011)
Lepisosteus oculates	si:dkey-28e7.3-201	ENSLOCG00000013653	LepOcu1 (December 2011)
Lepisosteus oculates	trak1a-201	ENSLOCG00000001329	LepOcu1 (December 2011)
Lepisosteus oculates	trak2-201	ENSLOCG00000010723	LepOcu1 (December 2011)
Maylandia zebra	si:dkey-28e7.3-201	ENSMZEG00005008443	M_zebra_UMD2a (April 2018)
Maylandia zebra	trak2-201	ENSMZEG00005006192	M_zebra_UMD2a (April 2018)
Maylandia zebra	trak1a-202	ENSMZEG00005002331	M_zebra_UMD2a (April 2018)
Neolamprologus brichardi	si:dkey-28e7.3-201	ENSNBRG00000023010	NeoBri1.0 (December 2011)
Neolamprologus brichardi	Unnamed (listed in tree as N.brichardi_1a)	ENSNBRG00000010142	NeoBri1.0 (December 2011)
Neolamprologus brichardi	trak2-201	ENSNBRG00000014231	NeoBri1.0 (December 2011)
Oncorhynchus mykiss	si:dkey-28e7.3-205	ENSOMYG00000018119	Omyk_1.0 (June 2017)
Oncorhynchus mykiss	Unnamed (listed in tree as O.mykiss_1a)	ENSOMYG00000039092	Omyk_1.0 (June 2017)
Oncorhynchus mykiss	trak2-201	ENSOMYG00000011517	Omyk_1.0 (June 2017)
Oreochromis niloticus	si:dkey-28e7.3-205	ENSONIG00000018805	O_niloticus_UMD_NMBU (June 2018)
Oreochromis niloticus	trak1a-202	ENSONIG00000007240	O_niloticus_UMD_NMBU (June 2018)
Oreochromis niloticus	trak2-202	ENSONIG00000011992	O_niloticus_UMD_NMBU (June 2018)
Oryzias latipes	si:dkey-28e7.3-203	ENSORLG00000025102	ASM223467v1 (July 2017)
Oryzias latipes	trak1a-201	ENSORLG00000005943	ASM223467v1 (July 2017)
Oryzias latipes	trak2-201	ENSORLG00000024460	ASM223467v1 (July 2017)
Poecilia formosa	si:dkey-28e7.3-201	ENSPFOG00000003564	Poecilia_formosa-5.1.2 (October 2013)
Poecilia formosa	trak1a-201	ENSPFOG00000018652	Poecilia_formosa-5.1.2 (October 2013)
Poecilia formosa	trak2-201	ENSPFOG00000001467	Poecilia_formosa-5.1.2 (October 2013)
Poecilia reticulata	si:dkey-28e7.3-203	ENSPREG00000000453	Guppy_female_1.0_MT (April 2014)
Poecilia reticulata	trak1a-204	ENSPREG00000013360	Guppy_female_1.0_MT (April 2014)
Poecilia reticulata	trak2-201	ENSPREG00000007459	Guppy_female_1.0_MT (April 2014)
Pundamilia nyererei	si:dkey-28e7.3-201	ENSPNYG00000002974	PunNye1.0 (December 2011)
Pundamilia nyererei	trak2-201	ENSPNYG00000009328	PunNye1.0 (December 2011)
Pundamilia nyererei	trak1a-201	ENSPNYG00000011722	PunNye1.0 (December 2011)
Salmo salar	si:dkey-28e7.3-201	ENSSSAG00000044165	ICSASG_v2 (June 2015)
Salmo salar	trak2-201	ENSSSAG00000031517	ICSASG_v2 (June 2015)
Salmo salar	trak1a-201	ENSSSAG00000004358	ICSASG_v2 (June 2015)
Scleropages formosus	si:dkey-28e7.3-201	ENSSFOG00015002821	fSclFor1.1 (April 2019)
Scleropages formosus	trak1a-208	ENSSFOG00015001806	fSclFor1.1 (April 2019)
Scleropages formosus	trak2-201	ENSSFOG00015004411	fSclFor1.1 (April 2019)
Stegastes partitus	si:dkey-28e7.3-201	ENSSPAG00000018438	Stegastes_partitus-1.0.2 (May 2014)
Stegastes partitus	trak1a-202	ENSSPAG00000017135	Stegastes_partitus-1.0.2 (May 2014)
Stegastes partitus	trak2-201	ENSSPAG00000001720	Stegastes_partitus-1.0.2 (May 2014)
Takifugu rubripes	si:dkey-28e7.3-201	ENSTRUG00000003718	fTakRub1.2 (June 2019)
Takifugu rubripes	trak2-201	ENSTRUG00000010804	fTakRub1.2 (June 2019)
Takifugu rubripes	trak1a-202	ENSTRUG00000002103	fTakRub1.2 (June 2019)
Tetraodon nigroviridis	si:dkey-28e7.3-201	ENSTNIG00000004864	TETRAODON 8.0 (March 2007)
Tetraodon nigroviridis	trak2-201	ENSTNIG00000010353	TETRAODON 8.0 (March 2007)
Tetraodon nigroviridis	trak1a-201	ENSTNIG00000006230	TETRAODON 8.0 (March 2007)
Xiphophorus maculatus	si:dkey-28e7.3-202	ENSXMAG00000000197	X_maculatus-5.0-male (December 2017)
Xiphophorus maculatus	trak1a-202	ENSXMAG00000008737	X_maculatus-5.0-male (December 2017)
Xiphophorus maculatus	trak2-201	ENSXMAG00000008010	X_maculatus-5.0-male (December 2017)