Table 7.
Protein structure similarity, interaction similarity score and estimated accuracy values after protein peptide dockings in GalaxyPepDock.
| Sequence | PDB | Protein structure similarity (TM-score) | Interaction similarity score | Estimated accuracy |
|---|---|---|---|---|
| ALPMHIR | 6LU7 | 0.989 | 67.0 | 0.765 |
| 6M03 | 0.990 | 67.0 | 0.767 | |
| 1P8J | 0.992 | 51.0 | 0.733 | |
| IPAVFK | 6LU7 | 0.989 | 88.0 | 0.812 |
| 6M03 | 0.990 | 88.0 | 0.814 | |
| 1P8J | 0.992 | 43.0 | 0.715 | |
| GLDIQK | 6LU7 | 0.989 | 64.0 | 0.759 |
| 6M03 | 0.990 | 64.0 | 0.760 | |
| 1P8J | 0.992 | 45.0 | 0.720 | |
| IIAEK | 6LU7 | 0.989 | 66.0 | 0.763 |
| 6M03 | 0.990 | 66.0 | 0.765 | |
| 1P8J | 0.992 | 45.0 | 0.720 | |
| EALEK | 6LU7 | 0.989 | 80.0 | 0.794 |
| 6M03 | 0.990 | 80.0 | 0.796 | |
| 1P8J | 0.992 | 43.0 | 0.715 | |
| TPEVDK | 6LU7 | 0.989 | 48.0 | 0.723 |
| 6M03 | 0.990 | 48.0 | 0.724 | |
| 1P8J | 0.992 | 47.0 | 0.724 |