Table 2.

Summary of Miseq reads.

Sample ID	Primer name	Raw data from Miseq	Passed reads of the quality control processes	With ≥ 97% identity to reference sequences	No. of OTUs
G-1	gSalamander	92,885	82,172	78,517	9

Sample ID	Primer name	Raw data from Miseq	Passed reads of the quality control processes	With ≥ 97% identity to reference sequences	No. of OTUs
G-1	glnsect	88,106	65,211	50,987	13
G-2	glnsect	17,643	6,912	6,807	3
S-2	glnsect	61,064	30,843	26,844	31
Total		166,813	102,966	84,638	47

Sample ID	Primer name	Raw data from Miseq	Passed reads of the quality control processes	With ≥ 97% identity to reference sequences	No. of OTUs
G-1	COI	57,190	32,752	9,258	14
G-2	COI	38,720	26,753	19,558	8
S-2	COI	80,731	39,456	16,108	37
S-3	COI	63,927	36,982	9,758	15
Total		240,568	135,943	54,682	74