Table 4.
Comparison | Model | Data set | Accuracy | 10-fold CV accuracy | Proportion correctly classified | ||
---|---|---|---|---|---|---|---|
Control | Mock-inoculated | Inoculated | |||||
All groups | Second derivative | Training | 0.822 | 0.708 | 0.825 | 0.786 | 0.854 |
Testing | 0.733 | — | 0.788 | 0.600 | 0.811 | ||
VSURF | Training | 0.830 | 0.664 | 0.775 | 0.810 | 0.899 | |
Testing | 0.714 | — | 0.576 | 0.600 | 0.946 | ||
Resampled | Training | 0.866 | 0.644 | 0.813 | 0.905 | 0.876 | |
Testing | 0.657 | — | 0.606 | 0.600 | 0.757 | ||
Mock vs. inoculated | Second derivative | Training | 1.000 | 0.757 | — | 1.000 | 1.000 |
Testing | 0.806 | — | — | 0.829 | 0.784 | ||
VSURF | Training | 0.890 | 0.832 | — | 0.810 | 0.966 | |
Testing | 0.861 | — | — | 0.829 | 0.892 | ||
Resampled | Training | 0.936 | 0.809 | — | 0.881 | 0.989 | |
Testing | 0.847 | — | — | 0.800 | 0.892 | ||
Control vs. inoculated | Second derivative | Training | 0.911 | 0.811 | 0.850 | — | 0.966 |
Testing | 0.886 | — | 0.848 | — | 0.919 | ||
VSURF | Training | 0.763 | 0.746 | 0.688 | — | 0.831 | |
Testing | 0.643 | — | 0.485 | — | 0.784 | ||
Resampled | Training | 0.710 | 0.704 | 0.650 | — | 0.764 | |
Testing | 0.643 | — | 0.545 | — | 0.730 |