Table 7. Effect of feeding Se-biofortified hay in a 9-week preconditioning period on the presence, and number of calves harboring per Control (C) and High-Se (Se) treatment groups, of the minor nasal microbiota phyla*.
Week 0 | Week 9 | Week 12 | P values | ||||||
---|---|---|---|---|---|---|---|---|---|
Phylum | C | Se | C | Se | C | Se | Wk 0 | Wk 9 | Wk 12 |
(n = 15) | (n = 15) | (n = 15) | (n = 15) | (n = 15) | (n = 15) | ||||
Acidobacteria | 13 | 12 | 0 | 7 | 2 | 3 | 1 | 0.002 | 1 |
Chlamydiae | 0 | 0 | 0 | 9 | 0 | 3 | 1 | 0.0007 | 0.22 |
Chloroflexi | 15 | 13 | 10 | 13 | 15 | 15 | 0.48 | 0.39 | 1 |
Elusimicrobia | 2 | 1 | 11 | 14 | 7 | 8 | 1 | 0.33 | 1 |
Fibrobacteres | 11 | 8 | 9 | 12 | 12 | 13 | 0.45 | 0.43 | 1 |
Fusobacteria | 2 | 2 | 6 | 10 | 14 | 14 | 1 | 0.27 | 1 |
GN02 | 9 | 6 | 9 | 10 | 12 | 11 | 0.17 | 1 | 1 |
Gemmatimonadetes | 10 | 11 | 1 | 8 | 12 | 9 | 1 | 0.01 | 0.43 |
Lentisphaerae | 4 | 9 | 15 | 15 | 14 | 12 | 0.14 | 1 | 0.60 |
OP11 | 0 | 1 | 0 | 8 | 0 | 0 | 1 | 0.002 | 1 |
Planctomycetes | 12 | 11 | 6 | 11 | 10 | 11 | 1 | 0.14 | 1 |
Spirochaetes | 12 | 8 | 14 | 15 | 15 | 15 | 0.25 | 1 | 1 |
TM7 | 0 | 0 | 0 | 11 | 0 | 6 | 1 | <0.0001 | 0.02 |
WPS-2 | 0 | 1 | 0 | 9 | 0 | 1 | 1 | 0.0007 | 1 |
Thermi | 10 | 9 | 14 | 15 | 15 | 15 | 1 | 1 | 1 |
Other Bacteria | 1 | 0 | 2 | 12 | 13 | 13 | 1 | 0.0007 | 1 |
*Phyla that were observed in 13 calves or fewer of Control and High-Se calves throughout the production stages (week 0 = weaning; week 9 = end of Se supplementation preconditioning period; week 12 = feedlot period) are presented as number of calves where phyla are present. Fisher’s Exact test was used to compare treatment groups at each time (0, 9, and 12 weeks).