Table 2.
The circRNA-miRNA-mRNA axis in I/R.
Tissues | Models | Species | Cell dysfunction | Expression | circRNA | miRNA | mRNA | Function | Mechanism | Relationship | Prediction tool | Ref |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Myocardial | MI/R in mice and HUVECs under I/R | Human; mouse |
Apoptosis; migration | ↓ | DLGAP4 | miR-143 | HECTD1 | Had no effect on apoptosis in endothelial cells; attenuated the I/R-induced increase in endothelial cell migration | The negative regulation of mimic-miR-143 on HECTD1 protein was abolished by the overexpression of circDLGAP4 | NR | Bioinformatics analysis | [61] |
IR | n/a | Apoptosis | ↓ | DLGAP4 | miR-143 | Bcl2 | A potential regulated therapeutic target of cardiomyocyte apoptosis in myocardial I/R injury | Functions as an endogenous miR-143 sponge | n/a | n/a | [60] | |
I/R in mice and H9C2 cells under H2O2 or H/R treatment | Mouse | Apoptosis | ↑ | NCX1 | miR-133a-3p | CDIP1 | Knockdown of circNCX1 in murine cardiomyocytes and heart tissues reduced the levels of CDIP1 and attenuated the apoptosis and I/R injury | Acting as an endogenous miR-133a-3p sponge | NR | RNA hybrid | [62] | |
IR in mice and mice primary cardiomyocytes under A/R treatment | Mouse | Apoptosis | ↑ | MFACR | miR-652-3p | MTP18 | The knockdown of MFACR attenuated the I/R-induced upregulation of mitochondrial fission, apoptosis, and MI size | Acts as a miR-652-3p sponge | NR | n/a | [63] | |
HUVECs under H/R treatment | Human | Proliferation; migration; angiogenesis | ↓ | circ_100338 | miR-200a-3p | FUS | Overexpression of circ_100338 promotes angiogenesis | circ_100338 can indeed regulate angiogenesis by binding to miRNA-200a-3p. | NR | n/a | [65] | |
I/R in mice | Mouse | Apoptosis | ↑ | TLK1 | miR-214 | RIPK1 | Overexpression of RIPK1 led to impaired cardiac function indexes, increased infarct area, and cell apoptosis | Acted as a sponge of miR-214 | NR | starBase | [64] | |
Cerebral | NSCs under OGD/R condition | Mouse | Apoptosis | ↑ | cZNF292 | miR-22 | Wnt/b-catenin; PKC/ERK | Silencing cZNF292 alleviated OGD/R-stimulated damage in NSCs | miR-22 expression was negatively regulated by cZNF292 | NR | n/a | [116] |
tMCAO/R in mice and mouse primary cortex neurons under OGD/R condition | Human; mouse |
Apoptosis; atrophy | ↑ | TLK1 | miR-335-3p | TIPARP | Knockdown of circTLK1 significantly decreased infarct volumes, attenuated neuronal injury, and improved neurological deficit | Functioned as an endogenous miR-335-3p sponge | NR | RNA hybrid; Arraystar, TargetScan; miRanda | [117] | |
MCAO/R in mice | Mouse | Apoptosis | ↑ | circRNA_008018 | miR-99a | PI3K/AKT/GSK3b | Knockdown of circ_008018 attenuated cerebral I/R-induced brain tissue damage and neurological deficits in mice | Inhibits the transcriptional activity of miR-99a | NR | starBase v.2.0; circBase | [118] | |
tMCAO/R in mice and mouse primary astrocytes under OGD/R condition | Human; mouse |
Autophagy | ↑ | Hectd1 | miR-142 | TIPARP | Knockdown of circHectd1 expression significantly decreased infarct areas, attenuated neuronal deficits, and ameliorated astrocyte activation in tMCAO mice | Functions as an endogenous miR-142 sponge | NR | RNA hybrid; TargetScan | [119] | |
HT22 cells under OGD/R condition | Mouse | n/a | ↑ | circRNA_015947 | miR-188-3p, miR-329-5p, miR-3057-3p, miR-5098, miR-683 | 99 target genes | Apoptosis-related pathways; metabolism-related pathways; immune-related pathways | May function as a sponge for its targeted miRNAs | n/a | TargetScan; miRanda | [115] | |
HBMECs under OGD/R condition | Human | Proliferation; apoptosis; inflammation | ↑ | ANRIL | miR-622 | p65 and IκBα | Overexpression of circANRIL significantly inhibited the proliferation of OGD/R-induced HBMECs and aggravated OGD/R-induced cell apoptosis | Served as an miR-622 sponge | NR | Bioinformatics analysis | [120] | |
Hepatic | I/R in mice | Mouse | Inflammation | ↑ | mmu_circRNA_005186 | miR-124-3p | Epha2 | mmu_circRNA_005186 silencing attenuated the LPS-induced inflammation | Serving as a miRNA sponge for miR-124-3p | NR | Cytoscape software | [128] |
Renal | HK-2 cells under I/R treatment | Human | Apoptosis; inflammation | ↓ | YAP1 | miR-21-5p | PI3K/AKT/mTOR | CircYAP1 overexpression expedited cell growth and weakened secretion of inflammatory factors and ROS generation in I/R-disposed cells | Sponge to miR-21-5p | RC | Circular RNA Interactome | [140] |
Intestinal | I/R in mice | Mouse | n/a | ↓ | circRNA_012412 | miR-7649-3p | Sertad1 | May play pivotal roles in endogenous protective signaling in iPoC | n/a | n/a | TargetScan; miRanda; miRDB | [149] |
↓ | circRNA_012412 | miR-3473c | Sertad1 | |||||||||
↓ | circRNA_012412 | miR-6991-3p | Nudcd1 | |||||||||
↓ | circRNA_012412 | miR-6991-3p | Jam2 |
↑: the upward arrow indicates increased expression of circRNAs; ↓: the downward arrow indicates decreased expression of circRNAs; n/a: not applicable; NR: circRNAs negatively regulate miRNAs; PR: circRNAs positively regulate miRNAs; RC: reciprocal correlations between circRNAs and miRNAs; circRNA: circular RNA; miRNAs: microRNAs; IRI: ischemia-reperfusion injury; NSCs: neural stem cells; HUVECs: human umbilical vein endothelial cells; HBMECs: human brain microvascular endothelial cells; tMCAO/R: transient middle cerebral artery occlusion/reperfusion; OGD/R: oxygen-glucose deprivation and reperfusion; H/R: hypoxia-reoxygenation; A/R: anoxia/reoxygenation; NCX1: sodium/calcium exchanger 1; MFACR: mitochondrial fission and apoptosis-related circRNA; ANRIL: antisense noncoding RNA in the INK4A locus; YAP1: yes-associated protein 1; TLK1: serine/threonine-protein kinase tousled-like 1; Bcl2: B-cell lymphoma protein 2; HECTD1: HECT domain E3 ubiquitin protein ligase 1; CDIP1: cell death-inducing protein; MTP18: mitochondrial protein 18 kDa; RIPK1: receptor-interacting serine/threonine-protein kinase 1; Epha2: ephrin type-A receptor 2; PI3K: phosphatidylinositol 3-kinase; AKT: protein kinase B; mTOR: mammalian target of rapamycin; Sertad1: SERTA domain-containing protein 1; Nudcd1: NudC domain-containing protein 1; Jam2: junctional adhesion molecule B; PKC: protein kinase C; ERK: mitogen-activated protein kinase; TIPARP: TCDD inducible poly(ADP-ribose) polymerase; GSK3B: glycogen synthase kinase 3 beta.