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. 2020 Nov 19;11:558403. doi: 10.3389/fpls.2020.558403

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Copyright © 2020 Lal, Vo, Sanjaya, Ho, Kim, Kil and Lee.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic analysis of DNA-R and DNA-S detected from Nanoviridae members. Phylogenetic relationships were generated using the iTOL software. Nevick file for iTOL was generated using MEGA7 program. Virus abbreviations: Subterranean clover stunt virus (SCSV), Black medic leaf roll virus (BMLRV), Faba bean necrotic yellows virus (FBNYV), Milk Vetch Dwarf Virus (MDV), Faba bean necrotic stunt virus (FBNSY), Pea yellow stunt virus (PYSV), Pea necrotic yellow dwarf virus (PNYDV), Cow vetch latent virus (CvLV), Sophora yellow stunt-associated virus (SYSaV), Milk vetch chlorotic dwarf virus (MVCDV), Banana bunchy top virus (BBTV), Abaca bunchy top virus (ABTV), Cardamom bushy dwarf virus (CBDV), and Coconut foliar decay virus (CFDV). (A) Phylogenetic tree of DNA-R generated from around 60 complete genome segments of DNA-R of all members of Nanoviridae. Circoviruses: Porcine circovirus 1 (PCV1), Porcine circovirus 2 (PCV2) were also analyzed due to similarity with Rep protein of nanoviruses. (B) Phylogenetic tree of DNA-S generated from around 60 complete genome segments of DNA-S of all members of Nanoviridae.