KEY RESOURCES TABLE
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| Mouse monoclonal RNA Polymerase II antibody (8WG16) | Neoclone | Cat#WP011 |
| Chemicals, Peptides, and Recombinant Proteins | ||
| 3-Aminopropyltriethoxysilane | Sigma-Aldrich | Cat#440140 or Cat#A3648 |
| Amine-reactive PEG, 5000 Da | Laysan Bio. | Cat#MPEG-SVA-5000 |
| 4-arm Star PEG succinimidyl succinate (Mn~10000 Da) | Laysan Bio. | Cat#4arm-PEG-SC-10K |
| Amine-reactive biotin-PEG, 5000 Da | Laysan Bio. | Cat#BIOTIN-PEG-SVA-5000 |
| Experimental Models: Cell Lines | ||
| HeLa S3 | ATCC | Cat#CL-2.2 |
| Experimental Models: Microbes | ||
| E. coli BL21-Codon-Plus(DE3)-RP | Agilent | Cat#230255 |
| E. coli BL21-Codon-Plus(DE3)-RIL | Agilent | Cat#230245 |
| E. coli BL21(DE3)pLysS | EMD Millipore | Cat#70236 |
| Oligonucleotides | ||
| AdMLP Transcription template no bubble, Top strand: 5’- /5BioTEG/GAA GGG GGG CTA TAA AAG GGG GTG GGG GCG CGT TCG TCC TCA CTC TCT TCC TCA TCA CTT TCT CCT ACC TCC CGG GCT GTT GGC TGC −3’ | This paper | N/A |
| AdMLP Transcription template −14/−3 bubble, Top strand: 5’- /5BioTEG/GAA GGG GGG CTA TAA AAG GGG GTG GGG CAT GCA AGT AGA TCA CTC TCT TCC TCA TCA CTT TCT CCT ACC TCC CGG GCT GTT GGC TGC −3’ |
This paper | N/A |
| AdMLP Transcription template −14/−3 bubble no TATA-box, Top strand: 5’- /5BioTEG/GAA GGG GGG CCT GCG GGC GGG GTG GGG CAT GCA AGT AGA TCA CTC TCT TCC TCA TCA CTT TCT CCT ACC TCC CGG GCT GTT GGC TGC −3’ |
This paper | N/A |
| AdMLP Transcription template, Bottom strand: 5’- /5Cy5/GCA GCC AAC AGC CCG GGA GGT AGG AGA AAG TGA TGA GGA AGA GAG TGA GGA CGA ACG CGC CCC CAC CCC CTT TTA TAG CCC CCC TTC –3’ |
This paper | N/A |
| AdMLP Transcription template no TATA-box, Bottom strand: 5’- /5Cy5/GCA GCC AAC AGC CCG GGA GGT AGG AGA AAG TGA TGA GGA AGA GAG TGA GGA CGA ACG CGC CCC CAC CCC GCC CGC AGG CCC CCC TTC –3’ |
This paper | N/A |
| mRNA detection oligo, 5’Cy3: 5’- /5Cy3/GAT GAG GAA GAG AGT −3’ |
This paper | N/A |
| mRNA detection oligo, scrambled, 5’Cy3: 5’- /5Cy3/AAA GGT AAG GAT GGG −3’ |
This paper | N/A |
| Recombinant DNA | ||
| pET-19b hTBP C262T KKCK | This paper | N/A |
| pET-11c KKCK-hTFIIB | This paper | N/A |
| pJL2 Gal4-VP16 F150C | This paper | N/A |
| pET-11c hTFIIγ | (Ozer et al., 1994) | N/A |
| pET-19b hTFIIAαβ | (DeJong and Roeder, 1993) | N/A |
| pET-11d hRap30 | (Wang et al., 1993) | N/A |
| pET-23d hRap74 | (Wang et al., 1993) | N/A |
| Software and Algorithms | ||
| IDL 6.4 | Harris Geospatial Solutions | https://www.harrisgeospatial.com/Software-Technology/IDL |
| Origin 8.5.0 | OriginLab | https://www.originlab.com/index.aspx?go=PRODUCTS/Origin |
DeJong, J., and Roeder, R.G. (1993). A single cDNA, hTFIIA/alpha, encodes both the p35 and p19 subunits of human TFIIA. Genes Dev 7, 2220–2234.
Ozer, J., Moore, P.A., Bolden, A.H., Lee, A., Rosen, C.A., and Lieberman, P.M. (1994). Molecular cloning of the small (gamma) subunit of human TFIIA reveals functions critical for activated transcription. Genes Dev 8, 2324–2335.
Wang, B.Q., Kostrub, C.F., Finkelstein, A., and Burton, Z.F. (1993). Production of human RAP30 and RAP74 in bacterial cells. Protein Expr Purif 4, 207–214.