Table 1.

Bioinformatic workflow numbers

	Count
Average number of RNA-Seq reads per sample	29,012,741
Junction with 6+ reads	186,784
Annotated junctions	175,225
Alternative splicing biomarkers from RNA-Seq (0.05 q-value)	256
Peptides 1% FDR and 0.1 E-value	79
Alternative splicing peptides from proteome	26