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. 2020 Nov 30;8:e10480. doi: 10.7717/peerj.10480

Figure 3. Molecular dynamics simulation for 20 ns.

Figure 3

(A) The RMSD during 20 ns simulation of the top 6 compounds after XP-docking. (B) The RMSD of ginsenoside, salvianolic acid B, neohesperidin and troxerutin. (C) The RMSD of Apo RdRP, docetaxel and echinacoside. Apo implies SARS CoV-2 RdRP without any ligands.