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. 2020 Nov 19;14(11):e0008860. doi: 10.1371/journal.pntd.0008860

Table 1. Primers for kdr-like diagnostic PCR and Nav gene fragments amplification and sequencing.

Name Sequence (5’→3’) Genome nucleotide positionΦ (VectorBase: CPIJ017894) Purpose Final conc. [nM]
ControlF AAT CAG ACA ACG TGG ACC GCT TCC A92919-C92896 Diagnostic PCR 125
ControlR GTT TTT CGT TCC CAC CTT TTC TTG CAT GC C92628-G92653 Diagnostic PCR 150
ResistantF TTC TTG GCC ACC GTA GTG ATA GGA AAT TTT T92758-A92729 Diagnostic PCR 150
SusceptibleR TAA GAC TTC ACG CTG GAA TAC TCA CGA CT A92701-A92729 Diagnostic PCR 250
SeqFPCR CAT TCA CAC TGG CTT CCA ATT TCG ACT AG C93037-G93009 Amplify PCR products to be sequenced 500
SeqRPCR GGA CGC AAT CTG GCT TGT TAA CTT GTT T G92188-T92215 Amplify PCR products to be sequenced 500
SequencingF GAC AAC GTG GAC CGC TTC CCA A G92914-C92895 Sequencing 5000

Φ The reverse strand of the annotated gene, CPIJ017894, in the genome SuperContig 3.1170 in VectorBase encodes a partial sequence of the Cx. quinquefasciatus Nav channel (sense strand) (see S1 Fig). The nucleotide positions shown here are as numbered in VectorBase.