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. 2020 Sep 26;27(12):3274–3289. doi: 10.1016/j.sjbs.2020.09.041

Table 5.

The inter-molecular interactions of the phytocompounds, Methanone, Oxazole and Bis-Phenylethyl with wild type EGFR (PDB Id: 1 M17) refined by MD simulations.

Inhibitor Hydrogen Bond Pi-Donor Hydrogen Bond Carbon Hydrogen Bond Pi-Sulphur Pi-Pi
T-shaped
Alkyl Pi-Alkyl Vander Waals Interactions Contact Residues
Methanone Thr830 Thr766 Val702, Cys773, Leu820 Phe699[2], Val702[2], Ala719, Lys721, Leu820 Leu694,Gly695, Ser696, Ile720, Met742, Cys751, Leu753, Leu764, Ile765, Thr766, Met769, Gly772, Asp831
Oxazole Met769 Leu694 Leu694[2], Val702[2], Ala719, Lys721, Leu820[2] Glu695, Thr766, Leu768, Gly772, Cys773, Asp831 Ser696, Gly697, Pro770, Phe771, Thr830
Bis-Phenylethyl Cys773 Phe699 Leu820 Phe699, Val702[2], Ala719, Lys721 Leu694, Gly695, Tyr703, Ile720, Met742, Leu764, Thr766, Asn818, Thr830, Asp831