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. 2020 Sep 26;27(12):3274–3289. doi: 10.1016/j.sjbs.2020.09.041

Table 10.

Inter-molecular interactions of the phytocompounds with EML4-ALK (PDB Id: 4Z55) refined by molecular dynamics simulations.

Inhibitor Hydrogen Bond Carbon Hydrogen Bond Pi-Lone Pair Amide-Pi Stacked Alkyl Pi-Alkyl van der Waals Interactions Contact Residues
Methanone Met708 Leu631, Val639[2] Leu631[2], Ala657, Val689, Leu705, Met720
Leu765[2]
Gly632, His633, Lys659, Ile680, Glu706, Leu707 Gly711, Gly778
Oxazole Met708 Lys659 Met708 Ala709 Ala657, Leu705 Leu631, Leu765 Gly710 Gly632, His633, Gly634 Val639, Val689, Glu706, Leu707, Gly711 Asp712, Gly778 Asp779
Bis-Phenylethyl Glu706, Met708 Leu631, Val639, Ala657 Ala657
Leu765 [2]
Lys659 Val689, Val689, Leu705 Leu707, Gly711, Asp712, Arg762, Asn763, Gly778 Asp779