Table 7. Summary of whole transcriptome shotgun sequence data for Chelydra serpentina.
Tissue Type | Sequencing Platform | Library Type | Read Length | Raw Reads | Mean read length | Bases (Gb) |
---|---|---|---|---|---|---|
Embryonic and Hatchling Hypothalamus/Pituitary | Illumina | Single-end | 50 bp | 172244331 | n/a | 8.61 |
Embryonic Gonads | Illumina | Single-end | 100 bp | 153596329 | n/a | 15.36 |
Hatchling Intestine | Illumina | Single-end | 50 bp | 31757630 | n/a | 1.59 |
Juvenile Heart | Illumina | Paired-end | 150 bp | 366536144 | n/a | 54.98 |
Cultured Embryonic Gonad Cells | Illumina | Paired-end | 50 bp | 446985548 | n/a | 22.35 |
Embryonic Gonads | 454 | Variable | 2255133 | 387 bp (151-825 bp) | 0.87 | |
Embryonic Adrenal-Kidney-Gonad Complex | Nanopore | Direct cDNA | Variable | 3164253 | 1386 bp (101-26870 bp) | 4.39 |
total = | 1176539368 | total = | 108.15 |