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. 2020 Oct 2;10(12):4411–4424. doi: 10.1534/g3.120.401580

Table 1. Results from QTL mapping for 168 individuals in the ‘Chandler’ × ‘Idaho’ mapping population for different color phenotypes. Interval was determined by Bayes 95% Credible Interval, Pvalues converted from LOD score cutoff determined from 1000 permutations of phenotypic data, R2 is the variance explained for QTL; if two years of data then R2 taken on multi-year data. Year of detection includes a single year of detection, or in both years 2016/2017.

Trait Population Chr Pos (cM) Interval Physical Position (bp) Pvalue R2 Year of detection
L* Chandler 1 9.58 5.00 - 18.00 4620011 4.87−6 0.107 17
L* Chandler 1 10.18 2.98 - 22.59 4756788 9.07−6 0.116 16, 17
L* Chandler 16 27.27 16.24 - 36.89 20234419 2.58−5 0.090 17
L* Idaho 10 59.11 41.25 - 65.66 14732679 3.53−5 0.090 16, 17
L* Idaho 14 34.02 27.00 - 42.00 6515088 1.11−4 0.076 17
a* Chandler 1 9.60 5.39 - 18.00 4532719 3.63−6 0.103 16, 17
a* Chandler 7 1.19 0 - 70.00 993462 9.29−6 0.105 16
a* Chandler 16 27.27 16.24 - 36.89 20234419 1.16−4 0.066 17
a* Idaho 10 59.11 41.25 - 65.66 14732679 9.14−5 0.090 17
a* Idaho 14 35.21 27.00 - 42.00 6764116 4.29−5 0.087 16, 17
b* Chandler 1 9.57 2.98 - 22.59 4620011 6.29−7 0.130 17
b* Idaho 1 48.12 35.10 – 53.00 13073793 7.16−5 0.082 16, 17
DFA Chandler 1 9.96 0 - 10.00 4223640 1.88−5 0.096 16, 17
DFA Chandler 4 13.69 8.93 - 25.00 17907379 8.09−5 0.087 16, 17
DFA Idaho 10 88.89 73.00 - 104.00 31577799 5.33−5 0.086 17
DFA Idaho 14 38.00 28.00 - 41.76 6764116 3.63−5 0.092 17