Table 1. Results from QTL mapping for 168 individuals in the ‘Chandler’ × ‘Idaho’ mapping population for different color phenotypes. Interval was determined by Bayes 95% Credible Interval, Pvalues converted from LOD score cutoff determined from 1000 permutations of phenotypic data, R2 is the variance explained for QTL; if two years of data then R2 taken on multi-year data. Year of detection includes a single year of detection, or in both years 2016/2017.
Trait | Population | Chr | Pos (cM) | Interval | Physical Position (bp) | Pvalue | R2 | Year of detection |
---|---|---|---|---|---|---|---|---|
L* | Chandler | 1 | 9.58 | 5.00 - 18.00 | 4620011 | 4.87−6 | 0.107 | 17 |
L* | Chandler | 1 | 10.18 | 2.98 - 22.59 | 4756788 | 9.07−6 | 0.116 | 16, 17 |
L* | Chandler | 16 | 27.27 | 16.24 - 36.89 | 20234419 | 2.58−5 | 0.090 | 17 |
L* | Idaho | 10 | 59.11 | 41.25 - 65.66 | 14732679 | 3.53−5 | 0.090 | 16, 17 |
L* | Idaho | 14 | 34.02 | 27.00 - 42.00 | 6515088 | 1.11−4 | 0.076 | 17 |
a* | Chandler | 1 | 9.60 | 5.39 - 18.00 | 4532719 | 3.63−6 | 0.103 | 16, 17 |
a* | Chandler | 7 | 1.19 | 0 - 70.00 | 993462 | 9.29−6 | 0.105 | 16 |
a* | Chandler | 16 | 27.27 | 16.24 - 36.89 | 20234419 | 1.16−4 | 0.066 | 17 |
a* | Idaho | 10 | 59.11 | 41.25 - 65.66 | 14732679 | 9.14−5 | 0.090 | 17 |
a* | Idaho | 14 | 35.21 | 27.00 - 42.00 | 6764116 | 4.29−5 | 0.087 | 16, 17 |
b* | Chandler | 1 | 9.57 | 2.98 - 22.59 | 4620011 | 6.29−7 | 0.130 | 17 |
b* | Idaho | 1 | 48.12 | 35.10 – 53.00 | 13073793 | 7.16−5 | 0.082 | 16, 17 |
DFA | Chandler | 1 | 9.96 | 0 - 10.00 | 4223640 | 1.88−5 | 0.096 | 16, 17 |
DFA | Chandler | 4 | 13.69 | 8.93 - 25.00 | 17907379 | 8.09−5 | 0.087 | 16, 17 |
DFA | Idaho | 10 | 88.89 | 73.00 - 104.00 | 31577799 | 5.33−5 | 0.086 | 17 |
DFA | Idaho | 14 | 38.00 | 28.00 - 41.76 | 6764116 | 3.63−5 | 0.092 | 17 |