Table 2. Most significant marker-trait associations from genome-wide association scan of (n = 528).

Trait	Chr	Position (bp)	Pvalue	aMAF	bR2	Effect (est)
L*	1	24588560	2.05−15	0.20	0.05	−1.02
L*	4	3580183	5.48−8	0.16	0.02	0.73
L*	5	7700218	2.73−11	0.10	0.07	−1.08
L*	8	28491012	2.49−11	0.07	0.04	−1.28
L*	9	14110666	8.11−8	0.47	0.07	0.63
L*	12	1886325	5.18−6	0.14	0.05	0.66
L*	12	3406040	2.66−6	0.47	0.06	0.88
L*	15	15274698	9.08−10	0.09	0.02	1.05
a*	1	37670750	7.41−7	0.11	0.05	−0.30
a*	8	24731099	5.22−8	0.09	0.07	−0.81
a*	8	18643646	1.64−14	0.10	0.04	−0.28
a*	10	34936156	7.66−9	0.45	0.04	−0.25
a*	11	36386668	5.44−6	0.05	0.03	0.23
a*	14	3094777	5.70−7	0.28	0.04	−0.26
a*	15	16729948	3.28−9	0.07	0.01	0.45
a*	16	26668826	2.39−5	0.09	0.04	0.26
b*	1	24588560	1.15−12	0.20	0.05	−1.02
b*	1	35482903	1.83−7	0.41	0.04	0.46
b*	7	5027345	7.56−6	0.06	0.05	−0.24
b*	7	43498845	2.61−6	0.09	0.06	0.44
b*	8	24680376	5.88−6	0.30	0.06	0.31
b*	9	11456318	7.44−7	0.24	0.06	−0.29
b*	10	12202442	1.03−8	0.43	0.04	0.38
b*	11	5382614	1.62−5	0.16	0.02	−0.35
b*	12	3406040	6.27−8	0.47	0.06	0.88
b*	13	26311574	6.23−6	0.09	0.01	−0.24
b*	13	34566210	2.73−7	0.06	0.05	0.63
b*	14	3126302	6.48−9	0.29	0.04	0.53
DFA	6	13137859	8.99−9	0.36	0.006	0.26
DFA	7	51065074	4.70−11	0.14	0.08	−0.13
DFA	8	28588006	4.25−6	0.07	0.02	0.17
DFA	9	14771377	1.62−6	0.43	0.03	0.05
DFA	12	25920027	4.26−7	0.49	0.05	−0.07
DFA	13	38230982	1.11−9	0.49	0.01	0.07
DFA	16	26455353	3.47−7	0.14	0.04	0.09

^aMAF minor allele frequency.

^bR² variance explained by significant SNP, P.value significance from Bonferroni taken from L* = model with 4 PCs, a* = model with 4 PCs, b* = model with 6 PCs, DFA = model from 5 PCs.