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. 2020 Dec 2;8:e10453. doi: 10.7717/peerj.10453

Table 4. Chi-square test for comparisons of resistance rates to antimicrobial agents among various phylogenetic groups of uropathogenic Escherichia coli isolates.

Antimicrobial resistance rates Phylogenetic group Chi- square P-value
B2 C E A F D B1 Unassignable Clade I and I or II Total
n = 122(%) n = 26(%) n = 25(%) n = 10(%) n = 9(%) n = 6(%) n = 5(%) n = 3(%) n = 2(%) n = 208(%)
Penicillins
AMP 101 (82.8) 25 (96.2) 21 (84) 8 (80) 6 (66.7) 6 (100) 4 (80) 3 (100) 1 (50) 175 (84.1) 16.707 0.054
β-lactam/ β-lactamase inhibitor combinations
AMC 39 (32) 17 (65.4) 9 (36) 3 (30) 4 (44.4) 1 (16.7) 3 (60) 0 0 76 (36.5) 16.906 0.050
TZP 2 (1.6) 7 (26.9) 1 (4) 0 1 (11.1) 0 0 0 0 11 (5.3) 29.961 0.000
SCF 5 (4.1) 7 (26.9) 1 (4) 0 0 0 0 0 0 13 (6.3) 22.477 0.007
Cephalosporins
KZ 54 (44.3) 18 (69.2) 11 (44) 1 (10) 5 (55.6) 2 (33.3) 1 (20) 1 (33.3) 0 93 (44.7) 15.248 0.084
CTX 53 (43.4) 18 (69.2) 11 (44) 1 (10) 5 (55.6) 1 (16.7) 1 (20) 1 (33.3) 0 91 (43.8) 16.977 0.049
CRO 53 (43.4) 18 (69.2) 11 (44) 1 (10) 5 (55.6) 1 (16.7) 1 (20) 1 (33.3) 0 91 (43.8) 16.977 0.049
CAZ 52 (42.6) 18 (69.2) 11 (44) 1 (10) 5 (55.6) 1 (16.7) 2 (40) 1 (33.3) 0 91 (43.8) 16.977 0.049
Carbapenems
IPM 0 3 (11.5) 0 0 0 0 0 0 0 3 (1.4) 21.307 0.011
MEM 0 3 (11.5) 0 0 0 0 0 0 0 3 (1.4) 21.307 0.011
ERT 0 3 (11.5) 0 0 0 0 0 0 0 3 (1.4) 21.307 0.011
Aminoglycosides
CN 43 (33.6) 12 (46.2) 9 (36) 1(10) 4 (44.4) 1 (16.7) 1 (20) 0 0 70 (33.7) 10.759 0.293
AK 0 0 0 0 1 (11.1) 0 0 0 0 1 (0.5) 25.121 0.003
NET 0 0 0 0 1 (11.1) 0 0 0 0 1 (0.5) 25.121 0.003
Fluoroquinolones
CIP 87 (71.3) 25 (96.2) 10 (40) 4 (40) 5 (55.6) 1 (16.7) 2 (40) 2 (66.7) 0 136 (65.4) 36.148 0.000
NOR 88 (72.1) 25 (96.2) 10 (40) 4 (40) 5 (55.6) 1 (16.7) 1 (20) 2 (66.7) 0 136 (65.4) 36.148 0.000
LEV 86 (70.5) 25 (96.2) 10 (40) 4 (40) 5 (55.6) 1 (16.7) 2 (40) 2 (66.7) 0 135 (64.9) 35.411 0.000
Folate pathway inhibitors
SXT 61 (50) 20 (76.9) 16 (64) 5 (50) 5 (55.6) 4 (66.7) 0 1 (33.3) 0 113 (54.3) 10.853 0.286
Fosfomycins
FOS 0 0 0 1 (10) 0 0 0 0 0 1 (0.5) 19.896 0.019

Notes.

Amp
ampicillin
AMC
amoxicillin-clavulanic acid
TZP
piperacillin-tazobactam
SCF
cefoperazone-sulbactam
KZ
cefazolin
CTX
cefotaxime
CRO
ceftriaxone
CAZ
ceftazidime
CN
gentamicin
CIP
ciprofloxacin
NOR
norfloxacin
LEV
levofloxacin
SXT
trimethoprim-sulfamethoxazole
IPM
Imipenem
MEM
meropenem
ERT
ertapenem
CN
gentamicin
AK
amikacin
NET
netilmicin
FOS
fosfomycin