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. 2020 Dec 4;10:21259. doi: 10.1038/s41598-020-78256-8

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Annotation of SNPs and InDels showing 100% allelic variations in salt sensitive and salt tolerant rice genotypes. (A) Distribution of SNPs and InDels in different genomic regions. (B) Distribution of SNPs and InDels in different genic regions. The number of synonymous (syn) and nonsynonymous (non-syn) SNPs and number of frameshift mutations detected within the CDS regions were shown for SNPs (top) and InDels (bottom), respectively.