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. 2020 Oct 26;10(4):193. doi: 10.3390/jpm10040193

Table 1.

The statistical results of additive model logistic regression analysis in the discovery and replication sets. CHR, chromosome. SNP, single nucleotide polymorphism. BP, physical position. A1, minor allele. TEST, logistic regression test method for the genetic model. OR, odds ratio. STAT, Coefficient t-statistic. P, p-value.

Information Discovery Replication
CHR SNP BP A1 TEST OR STAT p OR STAT p
1 rs3007782 4,472,736 T ADD 4.287 5.488 4.06 × 10−8 1.061 0.1557 0.8763
1 rs74918369 61,457,396 C ADD 8.071 6.242 4.31 × 10−10 2.133 1.283 0.1994
1 rs115143460 1.9 × 108 A ADD 13.33 7.047 1.83 × 10−12 3.37 × 10−9 0.0009 0.9993
1 rs12026894 2.45 × 108 A ADD 6.483 5.903 3.57 × 10−9 1.33 1.01 0.3125
2 rs12615054 22,223,766 G ADD 7.526 6.069 1.29 × 10−9 0.9204 −0.2382 0.8117
2 rs141292341 37,310,903 T ADD 10.14 6.5 8.05 × 10−11 1.38 0.4903 0.6239
2 rs145263938 87,842,313 T ADD 5.618 5.956 2.58 × 10−9 0.5837 −1.115 0.2648
2 rs12692712 1.65 × 108 C ADD 4.92 5.649 1.61 × 10−8 1.668 1.819 0.06891
2 rs79371157 2.28 × 108 T ADD 9.601 6.56 5.38 × 10−11 0.812 −0.3447 0.7303
3 rs28630998 13,245,725 G ADD 8.74 6.678 2.42 × 10−11 4.312 3.007 0.00264
3 rs2323277 74,110,248 A ADD 11.5 6.684 2.33 × 10−11 1.209 0.4123 0.6801
4 rs141002338 24,750,774 C ADD 10.45 6.536 6.32 × 10−11 0.5075 −1.032 0.3019
4 rs1510746 67,469,201 C ADD 6.439 5.839 5.25 × 10−9 0.6251 −0.9697 0.3322
5 rs144522971 22,316,095 T ADD 11.99 6.853 7.22 × 10−12 2.813 1.338 0.1811
5 rs296486 1.13 × 108 A ADD 8.526 6.41 1.45 × 10−10 2.628 2.506 0.01222
6 rs117716146 16,032,432 T ADD 11.65 6.789 1.13 × 10−11 0.8826 −0.1782 0.8585
6 rs111721931 1.1 × 108 G ADD 13.21 7.047 1.83 × 10−12 1.26 × 10−9 −0.0019 0.9985
6 rs137945470 1.18 × 108 A ADD 14.85 7.153 8.51 × 10−13 2.078 0.5152 0.6064
6 rs11759078 1.53 × 108 G ADD 4.917 5.565 2.62 × 10−8 0.9774 −0.0669 0.9467
6 rs113416075 1.66 × 108 A ADD 7.197 5.911 3.39 × 10−9 0.577 −1.466 0.1428
7 rs11761631 6,932,435 A ADD 3.595 5.276 1.32 × 10−7 0.9426 −0.2598 0.795
7 rs3807170 37,898,032 T ADD 6.065 5.735 9.76 × 10−9 0.721 −0.7404 0.4591
8 rs140245000 55,592,196 A ADD 10.09 6.695 2.16 × 10−11 2.11 1.041 0.298
8 rs137854443 1.45 × 108 C ADD 0.208 −5.769 7.99 × 10−9 NA NA NA
9 rs77096227 8,010,136 C ADD 3.712 5.139 2.76 × 10−7 0.9232 −0.3035 0.7615
9 rs149748677 78,256,026 A ADD 8.312 6.272 3.57 × 10−10 0.5173 −0.5861 0.5578
9 rs146186513 1.31 × 108 G ADD 13.33 7.047 1.83 × 10−12 NA NA NA
9 rs77609276 1.38 × 108 T ADD 8.534 6.201 5.60 × 10−10 0.7848 −0.4485 0.6538
10 rs78014704 1,842,302 T ADD 9.568 6.59 4.39 × 10−11 0.5369 −1.34 0.1803
10 rs34498403 86,799,865 T ADD 8.2 6.455 1.09 × 10−10 1.373 0.3439 0.7309
12 rs10877123 58,881,273 A ADD 3.971 5.498 3.84 × 10−8 1.111 0.4515 0.6516
12 rs74650809 92,513,269 A ADD 3.578 5.176 2.27 × 10−7 1.05 0.2121 0.8321
13 rs56238336 23,029,868 C ADD 4.942 5.737 9.65 × 10−9 1.546 1.448 0.1476
13 rs146581261 1.11 × 108 A ADD 14.3 6.992 2.71 × 10−12 1.682 0.9786 0.3278
14 rs1957293 92,708,417 A ADD 4.209 5.448 5.10 × 10−8 1.068 0.2128 0.8315
15 rs78879506 37,133,840 A ADD 10.6 6.534 6.39 × 10−11 1.125 0.3918 0.6952
15 rs57049930 93,855,283 T ADD 5.072 5.615 1.97 × 10−8 0.9163 −0.2447 0.8067
16 rs77141302 54,570,512 C ADD 4.301 5.826 5.68 × 10−9 1.138 0.4584 0.6466
16 rs149428 58,668,566 A ADD 8.74 6.479 9.21 × 10−11 0.2768 −1.683 0.09247
17 rs146234219 9,038,490 T ADD 13.33 7.047 1.83 × 10−12 3.36 × 10−9 0.0009 0.9993
17 rs17773918 11,399,739 G ADD 8.535 6.425 1.32 × 10−10 3.569 1.718 0.08571
19 rs1715092 3,557,005 A ADD 4.858 5.762 8.31 × 10−9 0.9295 −0.2799 0.7796
19 rs55941146 3,754,338 C ADD 13.33 7.047 1.83 × 10−12 4.75 3.885 0.000102
19 rs918371 48,808,545 T ADD 11.69 6.854 7.17 × 10−12 1.29 × 10−9 −0.0008 0.9993
21 rs16991683 35,800,134 A ADD 4.26 5.47 4.49 × 10−8 0.7194 −1.104 0.2696