Fig. 1.

Co-infecting microbes with SARS-CoV-2 and the diversity of ARGs in each sample. (a) Heatmap showing the abundance of different microbes within each sample, normalized to the number of unique reads mapped per million input reads (RPM) and log2 transformed. (b) Diversity of resistance genes observed in each sample, colored by the drug class to which these genes confer resistance. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)