Table 4.

Pairwise differences (percentage) among gp60 subtypes of C. viatorum for nucleotide (below the diagonal) and amino acid sequences (above the diagonal).

	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15
1	–	0	0	0.79	0.79	2.38	0.40	0.79	3.16	28.40	4.40	5.20	5.20	4.40	33.20	1	XVaA3a
2	0.25	–	0	0.79	0.79	2.38	0.40	0.79	3.16	28.40	4.40	5.20	5.20	4.40	33.20	2	XVaA3b
3	0.12	0.12	–	0.79	0.79	2.38	0.40	0.79	3.16	28.40	4.40	5.20	5.20	4.40	33.20	3	XVaA3c
4	0.50	0.50	0.37	–	0.79	2.39	0.40	0.79	3.17	28.92	4.42	5.22	5.22	4.42	34.14	4	XVaA3d
5	1.00	1.00	0.87	0.75	–	1.58	0.39	0	2.75	28.97	3.97	4.76	4.76	3.97	33.73	5	XVaA3e
6	1.50	1.50	1.38	1.25	0.49	–	1.98	1.58	2.77	29.60	4.00	4.80	4.80	4.00	33.60	6	XVaA3f
7	0.49	0.49	0.37	0.25	0.62	1.12	–	0.39	2.76	29.08	3.98	4.78	4.78	3.98	33.86	7	XVaA3g
8	0.62	0.62	0.49	0.37	0.49	0.99	0.12	–	2.36	29.08	3.59	4.38	4.38	3.59	33.86	8	XVaA3h
9	1.62	1.62	1.50	1.63	1.24	1.24	1.49	1.37	–	28.85	3.95	5.53	5.53	3.95	32.81	9	XVaA6
10	16.81	16.97	16.97	17.04	17.54	17.78	17.53	17.69	17.96	–	30.80	31.20	31.20	30.80	23.83	10	XVbA2G1
11	2.53	2.53	2.40	2.28	2.13	2.14	2.39	2.26	2.25	17.62	–	1.57	1.57	0.39	35.60	11	XVcA2G1
12	3.18	3.18	3.05	2.93	2.52	2.53	2.78	2.65	2.90	17.93	0.86	–	0	1.96	36.00	12	XVcA2G1a
13	3.31	3.31	3.18	3.06	2.65	2.66	2.91	2.78	3.03	18.10	0.99	0.12	–	1.96	36.00	13	XVcA2G1b
14	2.66	2.66	2.53	2.41	2.13	2.14	2.39	2.26	2.25	17.79	0.12	0.86	0.99	–	35.60	14	XVcA2G1c
15	19.55	19.57	19.39	19.83	20.69	20.60	20.32	20.49	19.71	12.61	21.29	21.97	22.16	21.47	–	15	XVdA3
	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15

The bolded subtype was obtained in the present study.