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The expected runtime of predicting binding sites of a specific RBP on a linear RNA and a circRNA using RBPsuite for sequences with different lengths
| RNA type | Sequence length | Time(s) |
|---|---|---|
| Linear RNA | 1000 | 5.62 |
| 10,000 | 15.43 | |
| 100,000 | 115.59 | |
| circRNA | 1000 | 9.07 |
| 10,000 | 9.79 | |
| 100,000 | 20.26 |
