TABLE 3.

Statistics of haplotype blocks defined by gene boundaries and ChIP-seq sites.

	380K, MAF = 0.05				320K, MAF = 0.10
	Autosome genes	Coding genes	Non-coding genes	ChIP-seq	Autosome genes	Coding genes	Non-coding genes	ChIP-seq
Total number of haplotypes	7,419,624	5,571,918	1,946,912	13,368,940	6,350,392	4,776,514	1,655,180	11,496,010
Number of blocks	18,080	12,676	10,111	21,474	17,238	12,168	9,262	20,967
Average number of haplotypes per block	410.38	439.56	192.55	622.56	368.39	392.55	178.71	548.29
Minimum SNPs per block	2	2	2	2	2	2	2	2
Maximum SNPs per block	87	87	64	104	82	82	55	87
Average number of SNPs per block	13.49	13.95	8.56	17.63	12.11	12.44	7.98	15.52
Minimum distance in block (Kb)	1.14	1.14	1.78	4.04	1.14	1.14	1.78	4.04
Maximum distance in block (Kb)	150.0	150.0	150.0	150.0	150.0	150.0	150.0	150.0
Average distance per block (Kb)	90.13	95.34	49.82	116.85	92.65	97.2	52.79	118.15
Autosome coverage (Mb)	1557.23	1158.16	463.33	2423.24	1528.13	1134.03	451.90	2393.44
% of autosomes	48.53	36.08	14.44	75.51	47.62	35.34	14.08	74.59
4-Kb extended coverage (Mb)	1629.55	1208.49	503.77	2509.14	1597.08	1182.70	488.95	2477.31
% of autosomes by 4-Kb extended coverage	50.78	37.66	15.70	78.19	49.77	36.86	15.24	77.20