Table 2.

Eukaryotic parasites and viruses identified from screening mosquito samples

Taxon targeted	Species identified (N positive)	Percentage Positive	Percentage Identity
Apicomplexa A	Theileria sp. (24)	3.60	100
Apicomplexa B	Plasmodium falciparum (8)	1.20	100
Apicomplexa C	Theileria sp. (3)	0.45	100
Microsporidia	Parathelohania anopheles (38)	5.71	92.47
	Hazardia milleri (1)	0.15	97.38
	Culicospora magna (6)	0.90	99.7
	Microsporidium sp. 3 NR-2013 (34)	5.11	97.01
Nematoda A	Acanthocheilonema viteae (12)	1.80	100
	Loa loa/Dipetolenma sp. (7)	1.05	99.64
	Setaria labiatopapillosa (11)	1.65	100
	Auanema rhodensis (1)	0.15	98.21
Nematoda B	Setaria yehi/Setaria digitate (4)	0.60	99.72
	Acanthocheilonema viteae (1)	0.15	99.72
	Dipetolenma sp./Filariodea sp. (3)	0.45	98.94
Flavivirus	Anopheles flavivirus variant 2 (2)	0.30	99.06
	Anopheles flavivirus variant 2/variant 1 (1)	0.15	88.26
	Culex flavivirus (1)	0.15	99.06

Table shows the parasite and viral taxon targeted by each primer, the species identified and number of mosquitoes positive for that species, the percentage of total mosquitoes positive, and the percentage match of the sequences amplified compared to that of the NCBI database