Table 1.
RT-PCR primers used.
| Gene | Primer Forward | Primer Reverse |
|---|---|---|
| A2M | GCCAACAAGGTGGATTTGAG | AGAGCTCAGCATCAGGCTTC |
| AASS | CTGTGGTGAGAGATGCAGTGA | TGCCCATTGAAAGTGACTGA |
| ABCA1 | TATGAGGGCCAGATCACCTC | TGCTCATCTCAGAGCGAATG |
| ACAT1 | AAATTCATATGGGCAGCTGTG | GCTTCCCATGCTGCTTTACT |
| ACHE | CACTGGTGGGAATGACACAG | ATCTACCACAGGCACGAAGG |
| ACTB | CTTCCTGGGCATGGAGTC | AGCACTGTGTTGGCGTACAG |
| ALS2 | ATACCCTGACACCCAAGCAG | GGTACCTGAGATGGCACTGG |
| APBA1 | CAGGAAGAAGGCTCCTGAAG | GGGTGGTCCATCATTGTCTC |
| APBA3 | CATCTCCTACACAGCCGACA | GATGAGCTGGGCGTCCTC |
| APBB1 | TTTGGAAGGATGAACCCAGT | AAGCTTCTCCTCCTCTTGGG |
| APBB2 | GACCCAGAAGCCAAGTGTTT | GGAAAGTTGCCTGATGCAGT |
| APH1a | CAGCCATTATCCTGCTCCAT | GGAATGTCAGTCCCGATGTC |
| APH1b | GTGTCAGCCCAGACCTTCAT | CAGGCAGAGTTTCAGGCTTC |
| APOA1 | CAGCTAAACCTAAAGCTCCTTGA | CTCAGGCCCTCTGTCTCCTT |
| APOE | GCAGACCGAGTGGCAGAG | CATCAGCGCCCTCAGTTC |
| APPBP1/NAE1 | TCACCAAACAGACTCCATCATT | TTGCCTGAATCTGCAATCATA |
| ATP5B | GCAGGAAAGAATTACCACTACCAAG | TGGTAGCATCCAAATGGGCAA |
| B2M | TGCTGTCTCCATGTTTGATGTATCT | TCTCTGCTCCCCACCTCTAAGT [26] |
| BDNF | TACTTTGGTTGCATGAAGGC | GCCAATGATGTCAAGCCTCT |
| C1orf43 | AGCTCTGGATGCCATTCGTACC | GTGTTTCGCAGATCCAGCAGGT |
| CASP3 | AAGCACTGGAATGACATCTCG | ATCACGCATCAATTCCACAA |
| CASP4 | GGAATGGAGCTGACTTTGACA | CTGACTCCATATCCCTGGCT |
| CAT | ATTCGATCTCACCAAGGTTTG | CTTGGGTCGAAGGCTATCTG |
| CDK5 | TGTGACCAGGACCTGAAGAA | TAGCACATTGCGGCTATGAC |
| CDKL1 | AGGGACCAAAGGGAATAACC | CACCCAACGATGAGTGTTTG |
| CLU | CAGCCCTTCCTTGAGATGAT | CGTCGCCTTCTCGTATGAAT |
| CSTB | CAGGACAAGCACTACGGATACA | CACAGAGAAAGCTCCCTCCA |
| CTSL | CCTGTGAAGAATCAGGGTCAG | GCCCAGAGCAGTCTACCAGA |
| DUOX1 | CTGGACATCCTGGTGGTCTT | ATCCTTGGAAATGAGGCCAT |
| ECE1 | TGATGATCAAGGACGGGAGT | TCTACCATGCACTCGGTCTG |
| ECE2 | ACCTGATCTGGAACCTGGTG | CTCGGCACACAGGACTTCTT |
| EIF4A2 | TGCTCTGCATGGTGACATGGAC | ATCCCGCGAGCCAACAAGTC |
| EMC7 | GTCAGACTGCCCTATCCTCTCC | CATGTCAGGATCACTTGTGTTGAC [50] |
| EP300 | TATGCCAACAGCAGCTCAAC | GGCTTGGACGAGTTTGTGA |
| EPX | GGCGTTGACTGTGAGAGGAC | GGAAGAAAGGGATGCAGTCA |
| ERCC2 | GAGCCCTTTGACGACAGAAC | TGACAGACTGGAAACGCTCA |
| ERCC6 | CAGCGGTTAAGGAGATGGAA | AAACCTTCGTCAAATTCAGCA |
| ERN1 | GTAATCTCTGAGGGCAGCCA | GTCTTCGTGCTTCTCTGGGT |
| GAPDH | ATTCCACCCATGGCAAATTC | GGGATTTCCATTGATGACAAGC |
| GAP43 | AGAGCAGCCAAGCTGAAGAG | CCGGGCACTTTCCTTAGGT |
| GNAO1 | CCAAATACTACCTGGACAGCCT | TGGGTTTCTACGATGCCAGT |
| GNB1 | TTGTGATGCTTCAGCCAAAC | TTTGGAAAGAAGCAAATGGC |
| GNB2 | CCACACTGGGTACCTGTCG | GTCTGCTGGCCTGTCTCAAT |
| GPI | CCAAGTCCAGGGGCGTG | CTTGTTGACCTCTGGCATCACA [50] |
| GPX1 | AGTTTGGGCATCAGGAGAAC | GCACTTCTCGAAGAGCATGA |
| GPX3 | AAGTCGAAGATGGACTGCCA | CCAGCATACTGCTTGAAGGG |
| GPX7 | AACAGGAGCCTGACAGCAAC | AGTCTGGGCCAGGTACTTGAA |
| GSK3a | GGTTCAAGAACCGAGAGCTG | TCGTCTTTCTTCTCGCCACT |
| GSK3b | CGGGATATTAAACCGCAGAA | CGAAACATTGGGTTCTCCTC |
| HADH2/HSD17B10 | CTGTCAACTGTGCAGGCATC | GCCCATGAGATTCACATCAAG |
| HDAC1 | AGCCGGTCATGTCCAAAGTA | TTGGCGTGTCCTTTGATAGTT |
| HMGCR | TCTTCCACGTGCTTGTGACT | CGTGCAAATCTGCTAGTGCT |
| HPRT1 | TGACACTGGCAAAACAATGCA | GGTCCTTTTCACCAGCAAGCT [26] |
| IDH1 | TTTGAAGAAGGTGGTGGTGTT | TCAGATACAAAGGCCAACCC |
| IL1A | GCAGTGAAATTTGACATGGGT | ATCTCCTTCAGCAGCACTGG |
| INSR | TATTGCCTCAAAGGGCTGAA | CTTTGGACAGGAGCAGCATT |
| LPL | GGGCATGTTGACATTTACCC | GCTGGTCCACATCTCCAAGT |
| LRP1 | TGGACTACCAGGATGGGAAG | ATGTCCATGTTGTTGCTGGA |
| LRP6 | CATGGGCCTAAAGGCTACAA | TTCAAAGCCAATAGGGCAAG |
| MAP2 | AATACAGCCCACCTCAGCAG | GGAGGAAGGTCTTGGGAGAG |
| MAPT | AGCCAAGACATCCACACGTT | AGGGTTGGATCAGAGGGTCT |
| MMP2 | ACGACCGCGACAAGAAGTAT | ATTTGTTGCCCAGGAAAGTG |
| MPRIP | ATCTCAGCCATCGAAGCCAT | TGGCTCTTCTCCAGCTCCC |
| NQO1 | AAAGGACCCTTCCGGAGTAA | CTCTGAATTGGCCAGAGAATG |
| NUDT15 | CCAACTCCCTGGAGGTCA | AGCTGCTTCTTCCCAGGTTT |
| PARK7 | TGGTGGTTCTACCAGGAGGT | GTAGGACCTGCACAGATGGC |
| PKP4 | ACAGCATCTGGGACCTTCAC | GGAACTCCGTAAGCCTGTCA |
| PLAT | GAGTGCACCAACTGGAACAG | TAGCACCAGGGCTTTGAGTC |
| PLAU | ACGACATTGCCTTGCTGAAG | GGCAGGCAGATGGTCTGTAT |
| POLR2F | CCCGAAAGATCCCCATCAT | CACCCCCCAGTCTTCATAGC |
| PPP1R15B | AGGTAGTCGGCTTCCAGACA | AGGCCTTCCGTAGAAAGAGG |
| PRDX1 | CAACTGCCAAGTGATTGGTG | CCAAAGGAATGTTCATGGGT |
| PRDX2 | CACCTGGCTTGGATCAACA | GCCGTAATCCTCAGACAAGC |
| PRDX6 | TTGTGAAGAGCCCACAGAAA | AACAAACACCACACGAGCTG |
| PRKAA1 | TGCACACATGAATGCAAAGA | GGCCTGCATACAATCTTCCT |
| PRKAA2 | CCAAATTATGCAGCACCTGA | CATGCTCATCATCAAATGGG |
| PRKCA | ACTTCATGGGATCCCTTTCC | TCCATGTTTCCTTCCTCGTC |
| PRKCD | AGGATGTGGTCCTGATCGAC | AACAGGTGGTCCTTGGTCTG |
| PRKCE | AGCTTTGGCAAGGTCATGTT | CAGTCCACGTCATCATCCTG |
| PRKCG | CAGGAGGAGGGCGAGTATTA | ACCCGCTCATACAATTCCAG |
| PRKCQ | CGAGAAACCATGTTCCACAA | GGTCCCACAGTGTTCACAGA |
| PRKCZ | ACAGACTACGGCATGTGCAA | ACGCTGAACCCGTACTCCT |
| PRNP | AACAAGCCGAGTAAGCCAAA | AAATGTATGATGGGCCTGCT |
| PSENEN | CATCTTCTGGTTCTTCCGAGAG | AGAAGAGGAAGCCCACAGC |
| PSMB4 | CTTGGTGTAGCCTATGAAGCCC | CCAGAACTTCTCGCAGCAGAG [50] |
| RN18S1 | GGAGTATGGTTGCAAAGCTGA | ATCTGTCAATCCTGTCCGTGT [51] |
| RPL13A | CCTGGAGGAGAAGAGGAAAGAGA | TTGAGGACCTCTGTGTATTTGTCAA [26] |
| SDHA | TGGGAACAAGAGGGCATCTG | CCACCACTGCATCAAATTCATG [26] |
| SH2D3C/CHAT | CCAAGGAGATGCAGACCCTA | TGTGGAACCTTTCCAGCAG |
| SNCA | ACCAGTTGGGCAAGAATGAA | CCCTTCCTCAGAAGGCATTT |
| SNCB | CTGGGAGGAGCTGTGTTCTC | CCACTTCCTCTGGCTTCAGAT |
| SNRPD3 | TGCCAGATGTCCAACATCACAGTC | ACATGGGTGCGTTCTTCAGCA |
| SOD1 | CAGCAGGCTGTACCAGTGC | ACATTGCCCAAGTCTCCAAC |
| TBP | CGGAGAGTTCTGGGATTGT | GGTTCGTGGCTCTCTTATC |
| TOP1 | TGAAAGTCCGGCAGAGAGCTG | GCCCACAGTGTCCGCTGTTT |
| TXNIP | TGTGAAGGTGATGAGATTTCCA | GCCATTGGCAAGGTAAGTGT |
| TXNRD2 | GCATGACTGGAGGAAGATGG | AAACCGTGTGCTCGTCAAC |
| UBC | GTGTCTAAGTTTCCCCTTTTAAGG | TTGGGAATGCAACAACTTTATTG [52] |
| UBQLN1 | GCAACCTAGAAAGCATCCCA | TGGATTACCACCAAACTGCTC |
| UCP3 | ATTTCAGGCCAGCATACACC | GGCAAAGTTCCTTTCCACAG |
| UQCRC1 | TGTCAGGAAGCTGTCTCGTG | TCTGGGCGAGGTCTAACAGT |
| UQCRC2 | ATGGCTTTGATTGGACTTGG | TTCACCTCCACGGTAGTTGG |
| XPA | CAACCAGGACCTGTTATGGAA | TGCAGTTATCACAAGTTGGCA |
| YWHAZ | ACTTTTGGTACATTGTGGCTTCAA | CCGCCAGGACAAACCAGTAT [26] |