Table 3.
The classes and properties reused or created for OD-ATTEST
| Label | Internationalized Resource Identifiers (IRIs)a | Reference ontology | |
|---|---|---|---|
| Classes | objecitve | iao:0000005 | IAOb |
| data source | iao:0000100 | ||
| measurement datum | iao:0000109 | ||
| dependent variable | obi:0000751 | OBIc | |
| independent variable | obi:0000750 | ||
| controlled variable | obi:0000785 | ||
| data processing | obi:0200000 | ||
| study | ncit:C63536 | NCItd | |
| hypothesis | ncit:C28362 | ||
| rationale | ncit:C80263 | ||
| primary outcome | ncit:C142644 | ||
| secondary outcome | ncit:C142680 | ||
| sample size | ncit:C53190 | ||
| missing data | ncit:C142610 | ||
| data validation | ncit:C142500 | ||
| data type | ncit:C42645 | ||
| data collection method | ncit:C103159 | ||
| data analysis | sio:001051 | SIOe | |
| minimum value | stato:0000150 | STATOf | |
| maximum value | stato:0000151 | ||
| median | stato:0000574 | ||
| mean | stato:0000573 | ||
| value range | stato:0000035 | ||
| percentile | stato:0000293 | ||
| data distribution | stato:0000161 | ||
| statistical sampling | stato:0000502 | ||
| outlier | stato:0000036 | ||
| primary predictor | od-attest:000015 | OD-ATTESTg | |
| secondary predictor | od-attest:000016 | ||
| demographic distribution | od-attest:000093 | ||
| outcome variable data source | od-attest:000019 | ||
| predictor data source | od-attest:000094 | ||
| cohort criteria | od-attest:000008 | ||
| descriptive statistic | od-attest:000012 | ||
| missing rate | od-attest:000068 | ||
| data source time coverage | od-attest:000023 | ||
| data source geographic coverage | od-attest:000024 | ||
| sources of bias | od-attest:000051 | ||
| data integration | od-attest:000052 | ||
| data extraction | od-attest:000054 | ||
| data cleaning | od-attest:000055 | ||
| integration strategy | od-attest:000056 | ||
| integrate variables from same level | od-attest:000057 | ||
| integrate variables from different levels | od-attest:000058 | ||
| creation of additional elements | od-attest:000059 | ||
| integration algorithm | od-attest:000060 | ||
| validation strategy | od-attest:000068 | ||
| integrated variable | od-attest:000096 | ||
| Properties | is determined by | od-attest:000097 | OD-ATTEST |
| has rationale | od-attest:000098 | ||
| has objective | od-attest:000099 | ||
| has data source | od-attest:000100 | ||
| has cohort criteria | od-attest:000101 | ||
| has demographic distribution | od-attest:000102 | ||
| has sources of bias | od-attest:000103 | ||
| has controlled variable | od-attest:000104 | ||
| has independent variable | od-attest:000105 | ||
| has dependent variable | od-attest:000106 | ||
| has data type | od-attest:000107 | ||
| has descriptive statistics | od-attest:000108 | ||
| has NIMHD level | od-attest:000109 | ||
| has NIMHD domain | od-attest:000110 | ||
| has data collection approach | od-attest:000111 | ||
| has sample size | od-attest:000112 | ||
| has missing data | od-attest:000113 | ||
| has data integration | od-attest:000114 | ||
| has data processing | od-attest:000115 | ||
| has data validation | od-attest:000116 | ||
| has integration strategy | od-attest:000117 | ||
| extracted from | od-attest:000118 | ||
| has description | od-attest:000119 | ||
| has time coverage | od-attest:000120 | ||
| has geographic coverage | od-attest:000121 |
aPrefix: iao: <http://purl.obolibrary.org/obo/IAO_>; obi: <http://purl.obolibrary.org/obo/OBI_>; ncit: <http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#>
sio: <http://purl.obolibrary.org/obo/SIO_>; stato: <http://purl.obolibrary.org/obo/STATO_>; od-attest: <http://purl.obolibrary.org/obo/OD-ATTEST/>
bInformation Artifact Ontology
cOntology for Biomedical Investigations
dNational Cancer Institute Thesaurus
eStatistics Ontology
fSemanticscience Integrated Ontology
gOntology for the Documentation of Variable and Data Source Selection and Integration Process