Table 1.

Pair-wise Fst (x 1000) between the Malay sub-ethnic groups and other populations in this study

	MY-BG	MY-JV	MY-MN	MY-KN	MY-KD	TH-PT	MY-TM	MY-JH	MY-KS	ID-JV	ID-ML	ID-TR	CN-JN	CN-WA	IN-WL	IN-DR	YRI
MY-BG
MY-JV	24
MY-MN	24	21
MY-KN	23	19	18
MY-KD	22	18	18	15
TH-PT	26	21	23	21	18
MY-TM	26	19	21	18	18	23
MY-JH	42	34	35	32	31	37	30
MY-KS	53	47	46	42	41	48	41	23
ID-JV	22	16	19	17	17	21	17	32	44
ID-ML	26	25	23	23	23	28	25	41	53	23
ID-TR	19	22	21	21	21	25	23	40	52	20	22
CN-JN	31	25	27	24	23	28	25	40	52	23	31	28
CN-WA	24	18	20	17	17	21	17	32	44	15	24	22	17
IN-WL	57	54	46	42	39	48	50	57	61	52	57	56	57	51
IN-DR	51	48	40	36	33	42	44	50	55	46	51	50	51	45	17
YRI	112	109	102	99	97	106	104	111	116	107	112	110	112	106	88	84

*The bold numbers indicate close genetic relationship between the populations.